Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1470 ATGGAAGACAAAGACAAAGCAGCAGCACCATCATCCCGCTCTGCAATACCTCCGACTGAGTTTACCACCGACTCTTCGAGCTGGGCTCTTGGGCCCGATGATTCTGACGGCGTCTATTTCTTCCCTGGCGACCGAGATACCAGCAGTATACTCACCGACTTCGGTTGGAATATCGAACCGGAGCAACCGCACCGGATCGGTGTCGATGATACATCTGATGTTGCGGGAGGAGAAGGCGTGAGCGGAGGAGGAGGATTGTGGTTTCCGGATAACTCTGCTCCCGTTGCCTCGACGGAACAAGCTGATAAGGTGAACTCTGCAGCGGTGGCCGATGCTTCCACATCGAATAATCAATCGGTGTCTTCGACCTCCAGCGAGGATCCGCACGAGAAGTCCACCGTCTCAGACGAAAAACCGCCGGAGATACCGAGTAAAAGTAAAAAGAAGGGGCAAAAGCGAATACGGCAGCCGCGGTTTGCATTTATGACAAAGAGTGAAGTTGATCATCTTGAAGATGGCTACAGATGGCGCAAGTATGGCCAAAAAGCTGTAAAAAACAGTCCATTTCCTAGGAGCTACTATCGTTGCACAAACAGCAAATGCACAGTGAAGAAAAGGGTGGAGCGTTCTTCGGAGGACCCAACCGTTGTGATAACAACGTACGAAGGCCAACACTGTCATCACACTGTTGGGTTCCCTAGAGCAGCAGCATCAATCATGAGCCATCATGAAGCCGCCGCCTTTGTGGCCGCCGCGGCCGCAGCTGGCCAGTTAGCTCCGACCATGTCACAGTTCTATTATCCCATCCAATTACCAAGAGACAACACTACTAACCTTTCTTCTCAGGCTCCTCCTCCTCCTACTCATCATCGTCACCAGCAGCAGGCACAGGATCATGAACCAACCGGAGGATCATCCCGCACCGTAATATGTCCAGCCGCCTCGCAGCAGCCTCCAGCCGATCAAGGACTTCTCGGAGACATCGTACCCCCAGGAATGCGCAATGGATGA 1011 0.5282 MEDKDKAAAPSSRSAIPPTEFTTDSSSWALGPDDSDGVYFFPGDRDTSSILTDFGWNIEPEQPHRIGVDDTSDVAGGEGVSGGGGLWFPDNSAPVASTEQADKVNSAAVADASTSNNQSVSSTSSEDPHEKSTVSDEKPPEIPSKSKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTVVITTYEGQHCHHTVGFPRAAASIMSHHEAAAFVAAAAAAGQLAPTMSQFYYPIQLPRDNTTNLSSQAPPPPTHHRHQQQAQDHEPTGGSSRTVICPAASQQPPADQGLLGDIVPPGMRNG 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1470 336 Gene3D WRKY domain 157 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele49g1470 336 MobiDBLite consensus disorder prediction 1 35 - -
Lele49g1470 336 SUPERFAMILY WRKY DNA-binding domain 162 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele49g1470 336 MobiDBLite consensus disorder prediction 273 291 - -
Lele49g1470 336 SMART WRKY_cls 170 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele49g1470 336 MobiDBLite consensus disorder prediction 15 30 - -
Lele49g1470 336 Pfam WRKY DNA -binding domain 171 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele49g1470 336 MobiDBLite consensus disorder prediction 93 128 - -
Lele49g1470 336 FunFam WRKY transcription factor 57 156 230 - -
Lele49g1470 336 ProSiteProfiles WRKY domain profile. 165 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele49g1470 336 MobiDBLite consensus disorder prediction 60 159 - -
Lele49g1470 336 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 106 285 IPR044810 GO:0003700
Lele49g1470 336 MobiDBLite consensus disorder prediction 298 315 - -
Lele49g1470 336 MobiDBLite consensus disorder prediction 273 336 - -
Lele49g1470 336 MobiDBLite consensus disorder prediction 129 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1470 Lele-ChrLele49 10815067 10819145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1470 20 335 WRKY Transcription Factor Family AT1G69310 50.464 4.99e-85 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele49g1470 WRKY 3.3e-25 CL0274