Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1445 ATGGAGAGCCACAGAATGCCGGTGGAGAACCGACGACGCCATTGGTGGCAACGCGAAAGCTCTTCAAGCTCTCAGACAACTCATCATATTCCCGCTTCTCTACTCTCACCAATCCAAGAAGCTCGGTATCAAATGGCCGCAAGGGTTGCTGCTGTACGGTCGTCCAGGCACTGGAAAGACAAGTCTAGTACGAGCAGTTGTTCAGTCCTCATTACACATAAAGCACATGTTGGGGAAAGTGAGAGAATTCTCCGTGAGGCCTTTGCAGAGGCATCATCTCATTCAACTTGGGGCAAGCCATCAGTTATCTTTATTGATGAAATAGATGTACTCTGTCCTCGGTGCTTTGAAAGGAACAAGATGTTTCGAATTGCTTCCCAGCTCTTCACGTTGATGGATTCAAATAAACCATCCTCATCTGTGCCAAGAGTTGTTGTGGTTGCATCAACTAACAGAGTGAATGCAATTGACCGAGCCCTTAGAAGGTATGGACGTTTTGACGCTGAAATTGAAGTTACTGCCCCAAATGAAGGGGAGCGTTGTCAAATTCTTAAGGTTGTACGTTTTGAAATGTTGATGGAATTCTGCCTTCAATTGCTTAATGACAAAACTGCATCTTGCAATGGATATGTTGGGGCTGATTCGGAAGCCTTGTGCCGTGAGGATGCTTTATTAGCAGCTAAAAGGTCCAGAGATGCAAATGGAAATGCTAGTCATTTAAGCATAACGATGGAAGATTGGAACAATGCAAGATCTGTTGTTGGTTCAAGCACAACAAGAGGTGTTACAGTGGAAATTCCTAAGGTGACTTGGGATGATATTGGGGGATTAAAAGAATTAAAGAAAAAGCTTCAGCAAGCAGTTGAATGGCCTATTAAGCACTCTGAAGTATTTTCAAGATTGGGCATTTCCCCTGTACGAGGGATTCTCTTGCATGGGCCTCCAGGATGTTCCAAAACAACCCTTGCAAAAGCTGCTGCACATGCTGGCCAAGCTTCTTTCTTTTCCTCGAGGGTTGATTCTTCGAGCAATAGAAGTACAGTTGGAGAGAGGCTTTTATCCACACTTCTGACTGAAATGGATGGTTTAGAAGAAGCTACAGGAATTCTTGTCTTGGCAGCTACAAATCGCCCTTATTCAATAGATGCTGCACTAATGCGCCCTGGACGTTTTGATCTGGTGCTGCAAGTGCCCTCGCCTGATTTGGAAGCTCGATATGAAATACTCTGTGTACATACACGTGGCATGAAGCTAGGGGATGATGTCAATCTCAAAAGACTAGCTAGCAGAAGATACCGATCGATTCATGAGTGCTGA 1317 0.4472 MESHRMPVENRRRHWWQRESSSSSQTTHHIPASLLSPIQEARYQMAARVAAVRSSRHWKDKSSTSSCSVLITHKAHVGESERILREAFAEASSHSTWGKPSVIFIDEIDVLCPRCFERNKMFRIASQLFTLMDSNKPSSSVPRVVVVASTNRVNAIDRALRRYGRFDAEIEVTAPNEGERCQILKVVRFEMLMEFCLQLLNDKTASCNGYVGADSEALCREDALLAAKRSRDANGNASHLSITMEDWNNARSVVGSSTTRGVTVEIPKVTWDDIGGLKELKKKLQQAVEWPIKHSEVFSRLGISPVRGILLHGPPGCSKTTLAKAAAHAGQASFFSSRVDSSSNRSTVGERLLSTLLTEMDGLEEATGILVLAATNRPYSIDAALMRPGRFDLVLQVPSPDLEARYEILCVHTRGMKLGDDVNLKRLASRRYRSIHEC 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1445 438 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 267 433 IPR027417 -
Lele49g1445 438 Gene3D - 175 254 - -
Lele49g1445 438 CDD AAA 275 399 - -
Lele49g1445 438 MobiDBLite consensus disorder prediction 1 18 - -
Lele49g1445 438 SMART AAA_5 42 176 IPR003593 -
Lele49g1445 438 SMART AAA_5 305 401 IPR003593 -
Lele49g1445 438 PANTHER AAA-FAMILY ATPASE 66 336 - -
Lele49g1445 438 Pfam ATPase family associated with various cellular activities (AAA) 335 398 IPR003959 GO:0005524|GO:0016887
Lele49g1445 438 Pfam ATPase family associated with various cellular activities (AAA) 70 172 IPR003959 GO:0005524|GO:0016887
Lele49g1445 438 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 250 IPR027417 -
Lele49g1445 438 Gene3D - 337 400 IPR027417 -
Lele49g1445 438 Gene3D - 80 257 IPR027417 -
Lele49g1445 438 Gene3D - 261 336 IPR027417 -
Lele49g1445 438 MobiDBLite consensus disorder prediction 1 31 - -
Lele49g1445 438 CDD AAA 98 172 - -
Lele49g1445 438 Gene3D - 401 433 - -
Lele49g1445 438 ProSitePatterns AAA-protein family signature. 369 387 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1445 Lele-ChrLele49 10550998 10558291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1445 240 429 Calmodulin-binding Proteins AT3G56690 38.793 1.37e-46 170