Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1435 ATGGCTCCCAATGCAAGCCCCAATTCAAGAGTTGCCAAGGCCTTCAGTGCTATGAGGGACTTAGGAATTTCTTGTGATGAAGTGAAACCAGTGTTGCAAAAGCTGTTAAGATTGTATGATAAGAAATGGGAATATATTGAAGAAGATAACTATCGGACGCTTGTAGATGCATACTTTGAGCTTAAGGACGATAAGGAAGCAGAAGGTAAGAGAAAAGCTCTCATCAGTCATCATGGTGGAGAAAGACAAACTCTATCATTGGTAGATGAAGATGATGTGCTTTTGTTAACCACCAACAACTCAAGACAAATATTATCTGAAGAAGAGAATGAAACGCCTGGAAATACTTTTGGACGGGAAATCATTGAATCATCTCAACCTTTGACGGGCCATATGAGACCTAAAATCTTTCCTCAATCATTGAAAGCAAGAATTAGTGAAGTAGAAAGGATATCAAAGAAGTTGCCTGGCATGGCGGCTATAGATAGAAAATCAAATTCTGAGCAAGAATCTTCTGCAAGGCATGGGGAAGAACCTCTTGTTAATCCAAGCTCTGCTCCTACTCGAAGAGAAAATCTACCAAATGGACATTGTAGGAAGGAGATAATGAAGCCGAAAACTGGACACAATAAATTACATCTTGGATCCAGTTCAACAAGTTGCAGAGGTCCATCTGAGGTTTTGACTAGAAATCATCCAGTCAAGTCGGTACCTTCTCTGTATCTGGATGTGAACAGTGTCATTGACGATTCTGCACATGATAACATTTACATTAACATTGACGATAACAACCCCAGAAGCAGAAAGGTTAATAACATTGACCTTGCCTCTTCACCATTGGGAGAAGTGAAAATTTCCTTAAACTGTGACCAAGCAGTTGGACGGCCAAACTTCAATATTCCAAACTTAAATGCTGTTATGAAGTTCGTGGAGCAGAAGTACCTTAAGCCTAGCAATATTGTTGGACCCCAATTTTCTATGGTGAGTTTATTAAACGGTTTGTGTGAGAGTTTCCTTAAATTGGGCATGAATATGAATCAAAAGCGTTCACATCCTGAGTTTAACAATGCAAATAGATTAACAAATGGCCCACAACAAGCTGTTGCTCAAGATGAGGGGAAGCTATTTCAGTTTCTTAATGACATAACAAAAGGCTCAGAAAAGGTGAAGATATCGTTGATAGATGAGTATGGTATTGGGGAATTGCCAAAGTTTAATTACATGCCACATAATCTAATATATCAGAGTGCTAATGTAAATATTTCACTAGCTCGTATTGCGGATGAAGATTGTTGCTCAAATTGTTTAGGAGACTGTCTTTCTCAAGCATTACCATGTGCATGTGCTCAAGAAACTGGTGGAGAGTTTGCTTACTCGCTGGAGGGCTTGTTGAAAGATGAATTTCTAACATCTTGCATGTCAATGAAAAAGGAACCTCAAGCTCATCAATTGGTGTACTGTCAAGAGTGCCCAATGGAGAGGTCTAAGAATGAATTCTTGCCTGAGAAATGCAAGGGGCACCTGATCAGGAAGTTCATTAAGGAATGTTGGAGGAAATGTGGATGTGACATGCAGTGTGGAAATCGTATAGTGTTCTTTTACGGTGAAGGAAAGGGCTGGGGCCTTAGAACACTAGAAGATTTGCCTAGGGGATCCTTTATATGTGAATATGTGGGCGAAATATTAACCAACATGGAGTTGTATGAAAGAATTCTGTACAAAAATGGCAATGATAGACATACATATCCTGTAACCCTTGATGCAGACTGGGGCTCAGAAGGGGTGTTAAAGGATGAAGAGGCACTGTGTTTAGATGCAACATATAATGGAAATGTTGCCAGGTTTATCAATCATAGATGCTCAGATGCAAATCTGATTGACATTCCCGTTGAAGTGGAGACTCCCGATCGCCATTATTATCATCTTGCCTTCTTCACTAACAAGAAAGTGAGAGCTTATGAGGAGTTGACGTGGGATTATGGTATTGACTTTGATGATCATGATCACCCTATCAAAGCATTTCAATGTTGTTGTGGGAGCTCATTCTGCCGCGATAGGAACCGGAAAGGGAAGCGAAAATTACGAAACGGGGGTGAGGCGAGAGGAAAGTCTAAACCAATGAAGATCCCTACTTCAACCATTATTGCAACTGCTGCACACAAACAACGTTCTTGA 2175 0.4028 MAPNASPNSRVAKAFSAMRDLGISCDEVKPVLQKLLRLYDKKWEYIEEDNYRTLVDAYFELKDDKEAEGKRKALISHHGGERQTLSLVDEDDVLLLTTNNSRQILSEEENETPGNTFGREIIESSQPLTGHMRPKIFPQSLKARISEVERISKKLPGMAAIDRKSNSEQESSARHGEEPLVNPSSAPTRRENLPNGHCRKEIMKPKTGHNKLHLGSSSTSCRGPSEVLTRNHPVKSVPSLYLDVNSVIDDSAHDNIYINIDDNNPRSRKVNNIDLASSPLGEVKISLNCDQAVGRPNFNIPNLNAVMKFVEQKYLKPSNIVGPQFSMVSLLNGLCESFLKLGMNMNQKRSHPEFNNANRLTNGPQQAVAQDEGKLFQFLNDITKGSEKVKISLIDEYGIGELPKFNYMPHNLIYQSANVNISLARIADEDCCSNCLGDCLSQALPCACAQETGGEFAYSLEGLLKDEFLTSCMSMKKEPQAHQLVYCQECPMERSKNEFLPEKCKGHLIRKFIKECWRKCGCDMQCGNRIVFFYGEGKGWGLRTLEDLPRGSFICEYVGEILTNMELYERILYKNGNDRHTYPVTLDADWGSEGVLKDEEALCLDATYNGNVARFINHRCSDANLIDIPVEVETPDRHYYHLAFFTNKKVRAYEELTWDYGIDFDDHDHPIKAFQCCCGSSFCRDRNRKGKRKLRNGGEARGKSKPMKIPTSTIIATAAHKQRS 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1435 724 MobiDBLite consensus disorder prediction 211 226 - -
Lele49g1435 724 Pfam Pre-SET motif 382 529 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele49g1435 724 Gene3D - 2 64 IPR043017 -
Lele49g1435 724 Gene3D SET domain 382 686 IPR046341 -
Lele49g1435 724 FunFam SET-domain containing protein lysine methyltransferase family protein 382 686 - -
Lele49g1435 724 ProSiteProfiles SET domain profile. 528 661 IPR001214 GO:0005515
Lele49g1435 724 MobiDBLite consensus disorder prediction 193 208 - -
Lele49g1435 724 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 723 IPR025776 -
Lele49g1435 724 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 693 - -
Lele49g1435 724 Pfam SET domain 539 661 IPR001214 GO:0005515
Lele49g1435 724 Pfam Ubiquitin-binding WIYLD domain 8 63 IPR018848 GO:0018024
Lele49g1435 724 SUPERFAMILY SET domain 398 684 IPR046341 -
Lele49g1435 724 SMART set_7 528 667 IPR001214 GO:0005515
Lele49g1435 724 MobiDBLite consensus disorder prediction 156 230 - -
Lele49g1435 724 CDD SET_SETDB-like 403 661 - -
Lele49g1435 724 SMART preset_2 379 521 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1435 Lele-ChrLele49 10438240 10442431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1435 513 684 C2H2 Transcription Factor Family AT2G23740 36.559 9.82e-26 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele49g1435 Pre-SET 2.1e-15 No_clan