Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1428 ATGAACCTGGAAGAGAAAGTCACCATGGACTCGGTTCAGCCATCTGAACACTACTGCTATGTTCGTTGCAACTTCTGCAACACTGTGCTTGCGGTTGGGATACCATGCAAGAGGCTGCTGGACACAGTGACAGTGAAGTGTGGGCATTGCAGCAACCTGTCTTTCCTCAGCACCAGGCCTCCTCCTCCATCGCATCACAATCACAACAAGGAAACCCATCATCATCGTGATCGTGATACTAATAATAATACTATTATTGATCACACACTCACCCTTCAGGGGTTTTATACCGATTACAAAAAGGGGCAAGCTTCATCGTCATCTTCCTCCTCCTTAGCTACGTCCAATGATCCTGGGTCCCCCAAGGCTGCACCTTTCGTTGTCAAACCTCCTGAGAAGAAACACAGACTTCCTTCAGCTTACAATCGCTTCATGAAAGAGGAGATACAGCGCATCAAAGCAGCTAACCCTGAGATTCCTCATCGGGAAGCTTTCAGCGCTGCTGCCAAAAATTGGGCAAGGTACATTCCAAATTCGCCAAGCACTTCCCTTTCAGCAAGAATAATGAAAGAGAGCTGTGTGGCAATAGAGTATTAG 597 0.4724 MNLEEKVTMDSVQPSEHYCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRPPPPSHHNHNKETHHHRDRDTNNNTIIDHTLTLQGFYTDYKKGQASSSSSSSLATSNDPGSPKAAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSPSTSLSARIMKESCVAIEY 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1428 198 SUPERFAMILY HMG-box 120 173 IPR036910 -
Lele49g1428 198 PANTHER PROTEIN YABBY 6-RELATED 13 182 IPR006780 GO:0007275
Lele49g1428 198 MobiDBLite consensus disorder prediction 58 82 - -
Lele49g1428 198 Gene3D High mobility group box domain 116 179 IPR036910 -
Lele49g1428 198 CDD HMGB-UBF_HMG-box 136 172 - -
Lele49g1428 198 FunFam protein CRABS CLAW isoform X3 127 187 - -
Lele49g1428 198 Pfam YABBY protein 14 175 IPR006780 GO:0007275
Lele49g1428 198 MobiDBLite consensus disorder prediction 106 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1428 Lele-ChrLele49 10394606 10396282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1428 1 186 C2C2-YABBY Transcription Factor Family AT1G69180 59.474 1.10e-65 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lele49g1428 YABBY 7.3e-57 CL0114