Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1417 ATGAGCTTTTCCAGTTCCTGCATTGACGTTCATTCTCAGAAGTCAGAACTGGCTAGTTCATTGAAACGCATGGACAAAATACTGGAACGCTATGAAAGATATAACTACTCAGAGAAGCAGCTTGCTGGAAATGATTCTGGGACGCAGGAAAACTGGCCTATTGAGTATTCAAGACTGAAGGCAAAGATTGATCTCATGCAGAGAAACCAAAGGCATTATATGGGCGAAGATCTTGCTTCACTCAGCCTCAAAGAGCTTCAGAGTTTAGAGCAACAACTAGAAACAGCTATCAAACACATCCGCACACGCAAAAACCAGCTCATGTACGAATCCATTTCTGAGCTTCAGAAAAAGGAGAAGGCGATACAGGAAGAGAATAGCATGCTTACAAAAAAGATAAAGGAGAGGGAGAAGGCTGCAACAGCAGCAGAGGCACAGCAGGCCCAATGGGAGCAGCCAAGCCACCAACCTGCTCCTCCTCCTTACCCTTCTTTCTTACTCCCTCATACTCTTCCCACTTTAATCAACAGTGGAAATAATTATGCTGAAGAAGAAACGGCAGTGGGAAGGAACGACGATCTTGACCTGACCCTGGAGCCACTATATGGCTACCACCTCAGTTGCTTTACTTCAAGATTATAA 642 0.447 MSFSSSCIDVHSQKSELASSLKRMDKILERYERYNYSEKQLAGNDSGTQENWPIEYSRLKAKIDLMQRNQRHYMGEDLASLSLKELQSLEQQLETAIKHIRTRKNQLMYESISELQKKEKAIQEENSMLTKKIKEREKAATAAEAQQAQWEQPSHQPAPPPYPSFLLPHTLPTLINSGNNYAEEETAVGRNDDLDLTLEPLYGYHLSCFTSRL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1417 213 MobiDBLite consensus disorder prediction 139 169 - -
Lele49g1417 213 Pfam K-box region 48 133 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele49g1417 213 ProSiteProfiles K-box domain profile. 49 139 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele49g1417 213 Coils Coil 83 106 - -
Lele49g1417 213 Coils Coil 112 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1417 Lele-ChrLele49 10256332 10263030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1417 10 211 MADS-box Gene Family AT1G26310 53.333 1.32e-66 204