Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1391 ATGGCTCAAGATACTTCCAGCACAGATTCAAATTATAAGCGCCAAGGTCTCTTGAAAGATCAAGTTCGTTTGGTTAGAAGGAAAGACTCTGATCGCTATGAGATTGTCCCAATCGATGATCTTCTATCCTTTGACAAGGGTTTCTTTATAGTAATCCGTGCTATCCAAATGTTAGCCCAGAAAAATGATGGAATGATATTGGTAGGTTTAGCTGGCCCTTCAGGGGCTGGTAAGACTATATTTACAGAAAAAATACTCAACTTCATGCCTGGCATTGCAGTCATTTCAATGGACAATTACAATGATTCCAGTCGAATTGTTGATGGGAACTTTGATGATCCACGCTTAACGGACTATGACACGTTGCTCCAGAATGTCCACGATTTGAAGGCAGGAAAATCAGTTGAGGTTCCAATCTATGATTTTAAGTCCAGTTCACGCACAGGATACAGGACAGTTGAAGTCCCCAGCTCCCGTATTGTGATTATAGAGGGAATCTATGCATTGAGTGAGAAGTTGCGGCCCCTACTGGACCTTCGAGTATCCGTCACGGGTGGAGTTCACTTGGACCTTGTCAAACGAGTTATTCGTGACATACAACGTGCTGGCCAAGAACCTGAAGAAATTATTCATCAAATATCTGAGACGGTATACCCAATGTACAAGGCCTTTATTGAACCAGATCTTCAGACAGCACATATCAAAATAATCAACAAGTTCAATCCATTTACTGGTTTTCAAAGTCCTACCTACATATTAAAGTCAGCAAGGAAAGTAACAGTTGATGAAATCAAAGCTGTTCTCTCTGAAGATTATAAGGAAACAACGGAGCAGACATATGACATATATCTGCTACCTCCTGGTGAAGATCCAGAAACTTGCCAATCATACCTACGGATGCGGAATAAGGATGGGAAATACTGTCTCATGTTTGAGGAATGGGTAACAGATAATCCTTTTGTAATATCACCAAGAATTACTTTTGAAGTAAGTGTGCGCCTTCTTGGTGGACTTATGGCCTTGGGATACACTATCGCTACCATCCTTAAAAGAGACAGCCATGTACTCTCTGATGATAGGATTTGTGTAAAACTTGATTGGCTTGAGCAACTTAATCGACATTATGTTCAGGTGCATGGAAGAGATCGCATGGTTGTGAAATATGTAGGAGAGCAGCTGGGCCTGGATGGCTCTTACATTCCTCGTACCTACATTGAACAAATTCAACTTGAAAAGCTTGTAAATGAAGTTATGGCCTTGCCGGATGATTTGAAGACAAAGCTTAGCCTAGATGAGGATTTGGTGTCGAGCCCCAAAGAAGCACTTTCTCGAGCCTCTGCGGACAGGGTCGCCATGAGAAATAAGCATATCAGAAGCTTGTCACAATCATATACAAATCAAAGGGACAATAATCTAGCCAAACTTGCAATATATGCTTCCAAGAATCGTGGGTTTAGTGAAAGAACTCTGGATTTGGCAACAGCACCATCAAACCAGGTAAACATCACTCAGCTTTCCGAATTAATCTCCTCTCTTAATGATAGAATGGACGAATTTACAAATCGTATTGAGGAGCTGAACTCAAAGTTAGCTATCAAGAAAAATTCTCTCAGCCAACAAAATATGTCTCTCCAACCTGAAGCCTGCAATGGATCTGCTCCTACCTCTTACTTCCTCACTAGTCTAGGAAATGGCTCCTTAACTGGATCCATTATGCCAAATTCCTCATCTTCATTACAGTCAGCCAAAGAATCACCTTTAAGTAAAGAGTTATCAGGTATTGCAAGGAGCCAGCACCAGATGATACACCAACTGGACAATCTGAATAATCTTCTTAAGGGAAACATTGCAAACAAGTGTAGCCAACCAAGAACCTGCAACAGAACCATGGCTGATACTGAATCAGAGTCCAGTGGTGTGCGTGTTATGGTGACTGTGACTATTGGGGTTTTGGGGATCTTCTTGATGAAGGGTTTGTTGAAGAGAAATTGA 1992 0.4142 MAQDTSSTDSNYKRQGLLKDQVRLVRRKDSDRYEIVPIDDLLSFDKGFFIVIRAIQMLAQKNDGMILVGLAGPSGAGKTIFTEKILNFMPGIAVISMDNYNDSSRIVDGNFDDPRLTDYDTLLQNVHDLKAGKSVEVPIYDFKSSSRTGYRTVEVPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTGFQSPTYILKSARKVTVDEIKAVLSEDYKETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYCLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRDSHVLSDDRICVKLDWLEQLNRHYVQVHGRDRMVVKYVGEQLGLDGSYIPRTYIEQIQLEKLVNEVMALPDDLKTKLSLDEDLVSSPKEALSRASADRVAMRNKHIRSLSQSYTNQRDNNLAKLAIYASKNRGFSERTLDLATAPSNQVNITQLSELISSLNDRMDEFTNRIEELNSKLAIKKNSLSQQNMSLQPEACNGSAPTSYFLTSLGNGSLTGSIMPNSSSSLQSAKESPLSKELSGIARSQHQMIHQLDNLNNLLKGNIANKCSQPRTCNRTMADTESESSGVRVMVTVTIGVLGIFLMKGLLKRN 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1391 663 CDD UMPK_like 67 239 - -
Lele49g1391 663 SUPERFAMILY CYTH-like phosphatases 262 407 IPR033469 -
Lele49g1391 663 PRINTS Uridine kinase signature 132 147 - -
Lele49g1391 663 PRINTS Uridine kinase signature 188 198 - -
Lele49g1391 663 PRINTS Uridine kinase signature 65 82 - -
Lele49g1391 663 PRINTS Uridine kinase signature 224 237 - -
Lele49g1391 663 Pfam CYTH domain 267 404 IPR023577 -
Lele49g1391 663 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Lele49g1391 663 Coils Coil 502 536 - -
Lele49g1391 663 PANTHER URIDINE KINASE 30 423 - -
Lele49g1391 663 Gene3D - 65 258 IPR027417 -
Lele49g1391 663 ProSiteProfiles CYTH domain profile. 252 410 IPR023577 -
Lele49g1391 663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 236 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1391 Lele-ChrLele49 9865231 9872662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1391 53 236 PRT Gene Family AT1G55810 28.351 3.33e-17 82.8