Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1368 ATGGCCACCACCACTCTTGCAATAGTCTCCAGATTTTCTATTCATCTGTTCAGCATTCTCTTCAACTACCTCAAGCTAGCTGCTTCCAATTTCAAATGGGTTTTAGAGTTCCTTCTCTACCACCCATTTTACAGCCTTGGTGTTCGTCATCATCAACCCCTTCATCAAGAGTTTCAGATGGTTACAGAAGATGGAGTTGAAATCTGGCATCCTCGTCGTCGTGAAGGAGAACGCGAAGATGAAGAAGAAGTGGATTGTGCAGTGTGTCTGAACAAGATTAGTGAAGGAGATGAAGTTAAAGTGTTGAGGTGCGAGCATGTTTTTCATAGAGATTGTTTTAATCAATGGGTTGGATTTAGGAACTTTACTTGTCCTATTTGTAGGGACTTTCTGGTCTCTGGGATTAGATCTGTTGATGGTGAGGGAGAAGGAGAAGCACGTGTGCTTTTCTTTAAGTTTTCTTCGTTTCTGATAATAATTCTGAACGCGAGAACTGGTGGCTACGGCGCAGGCAGACTAAGGATTTTGAAAAAGAATGAGAAGCAGGAAATCATGTTGAAAACGGCGAAGAAGAAGACTTGTGAAGTTTCTGACGGAGAAGAGATCGACAAATGA 615 0.4211 MATTTLAIVSRFSIHLFSILFNYLKLAASNFKWVLEFLLYHPFYSLGVRHHQPLHQEFQMVTEDGVEIWHPRRREGEREDEEEVDCAVCLNKISEGDEVKVLRCEHVFHRDCFNQWVGFRNFTCPICRDFLVSGIRSVDGEGEGEARVLFFKFSSFLIIILNARTGGYGAGRLRILKKNEKQEIMLKTAKKKTCEVSDGEEIDK 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1368 204 PANTHER RING ZINC FINGER PROTEIN-RELATED 67 132 - -
Lele49g1368 204 SUPERFAMILY RING/U-box 78 132 - -
Lele49g1368 204 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 132 IPR013083 -
Lele49g1368 204 Pfam Ring finger domain 85 128 IPR001841 -
Lele49g1368 204 ProSiteProfiles Zinc finger RING-type profile. 86 128 IPR001841 -
Lele49g1368 204 SMART ring_2 86 127 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1368 Lele-ChrLele49 9598420 9601369 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1368 85 133 C3H Transcription Factor Family AT1G15100 57.143 8.51e-15 67.0