Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1366 ATGGCCACCATCACCACCACTCTTGCAGTAGTCTCCAGATTTTCTATTCATCTGTTCAGCATTCTCTTCAACTACCTCAAGCTAGCTGCTTCCAATTTCAAATGGGTTTTAGAGTTCCTTCTCTACCACCCATTTTACAGCCTTGGTGTTCGTCATCATCAACCCCTTCATCAAGAGTTTCAGATGGTTACAGAAGATGGAGTTGAAATCTGGCATCCTCGTCGTCGTGAAGGAGAACGCGAAGATGAAGAAGAAGTGGATTGTGCAGTGTGTCTGAACAAGATTAGTGAAGGAGATGAAGTTAAAGTGTTGAGGTGCGAGCATGTTTTTCATAGAGATTGTTTTAATCAATGGGTTGGATTTAGGAACTTTACTTGTCCTCTTTGTAGGGACTTTCTGGGCTCTGGGATTAGGTCTGTTGATGGTGAGGGAGAAGGAGAAGCACGTGTGCTTTTCTTTAAGTTTTCTTCGTTTCTTGATAATAATTCTGAACGCGAGAACTGGTGGCTACGGAAAGGGGAAGACCATGAAGTGCCTTCTTTGGTTTTCAGTTTGGAACTTTTACAAATTACTCCTTCCAATCCTATATGCGCAGGCAGACTAAGGATTTTGGAAAAGAATGTGAAGCACGAAATCATATTGAAAAAGGCTAAGAAGAAGAAGACTTGTGAAGTTGCTGACGGAGGAGAGATTGAGAAATTAATAGATCAAAAAGCCATGACGGAGTGGAAGGAAGAGACCATGAATTGTTCCAAGTATTGCATCATCACTTAG 774 0.4173 MATITTTLAVVSRFSIHLFSILFNYLKLAASNFKWVLEFLLYHPFYSLGVRHHQPLHQEFQMVTEDGVEIWHPRRREGEREDEEEVDCAVCLNKISEGDEVKVLRCEHVFHRDCFNQWVGFRNFTCPLCRDFLGSGIRSVDGEGEGEARVLFFKFSSFLDNNSERENWWLRKGEDHEVPSLVFSLELLQITPSNPICAGRLRILEKNVKHEIILKKAKKKKTCEVADGGEIEKLIDQKAMTEWKEETMNCSKYCIIT 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1366 257 ProSiteProfiles Zinc finger RING-type profile. 88 130 IPR001841 -
Lele49g1366 257 SUPERFAMILY RING/U-box 80 134 - -
Lele49g1366 257 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 135 IPR013083 -
Lele49g1366 257 PANTHER RING ZINC FINGER PROTEIN-RELATED 68 141 - -
Lele49g1366 257 Pfam Ring finger domain 87 130 IPR001841 -
Lele49g1366 257 SMART ring_2 88 129 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1366 Lele-ChrLele49 9583904 9586631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1366 87 135 C3H Transcription Factor Family AT1G15100 57.143 1.46e-13 65.1