Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1362 ATGTCGGTGGCATCACCGTCTCCGGCGGCAGCCACCGTGCCCACACCACCAACTCCCTCCACCAATAGTAGTGCACCGCCGCCCGCCACAACTCCGCCACCACAATCCTCTTCACTCGCGCCACCGGGTAATTCCACTTCGCCGCCGACTTCAGCACCTCCGCCATCTTCAACCCCATCCACACAGTCTCCACCTCCGTCGCCTCCGCCAGCTCAATCACGGCCACCTCAGGCATCACCACCCCCTCCCGCTGTGCCGTCGCCTCCGCCAGCTCAGTCACGGCCACCTCAAGCATCACCACCCCCTCCGTCTGTCACTCCACCCCCATTGTCTCCTCCTCCACAATCGGTTGCACCTGCGTCACAACCACGACCTCCGCCTAATGCTACCCCGCCTACTTCTCCTGTACTTTCTCCCCCACCATCACGACAGTCACCGGCTCCACCGGTGAGTTCTCCTCCGCCAGCAAATTCATCCCAACCACCGCCATCTAACCCATCTCCAGTGCCATCGCCACCTGGCCCTTCGGCAAATCCGCCAAGAAGTTCCCCTCCACCTCCTACACCATCGTCAAACCCTCCCCAAAACTCCCCTCCGCCACCTCCACCAACGTCAAACCCTCCGGAAAACTCACCTCCACCACCGACATCAAGGCCCCCTGGAAATTCATCTTCACCACCGAATACTTCACCACCTCCGCCTGTGGCTGTGCCACCCCGAGGGTCATCACCACCAGCATCAGCGCCGCCTGTAAATTTACCTGCCCCTGCGGCACCTCGGATAAGTCCACCTAGTTCTCAACCAAGTCCTCCTTCAAATTCCACCCCAAATTCACCTCCGCCGCCCCCCATAGTTCGAATGGCTCCACCTCCGTCCTCACTTTTGTCACCTCCAGCTTCTCAAAATTCCTCCCCACCATCAGAGAGTGGAACGGAAAGTTCAAACGCCAGGGCAAAGAGTGGCATCGATACTGGTGTTGCAGTGGTTATTGGTGTAGCAGGGGGAATTATAGTGCTTACCTTGATTGGAATTCTTGCCTGGTGCCTGATAAGGAGGCAAAAGAAACGGGGACCTGAGAGTGGTAGTTATGTCATGCCATCCACTTCTGGTTCACTACCGGAGTCAGATTCATCCTTTTTTAAGACACATTCTTCAGCTCCTCTTGTACAAAGTGGTTCCGGTAGTGACACTGTTTACACGCCATCTGAGCCGGGTGGACTAGGCAACTCAAGGACATGGTTTACATACGAAGAACTAGTCAAAGCTACAAATGGTTTTGCGCCTCAAAATTTTTTGGGTGAGGGTGGATTTGGTTCTGTATATAAAGGATACCTACCAGATGGGAGAGAGATAGCAGTCAAACAACTGAAAATTGATGGGGGTCAGGGCGAAAGGGAATTCAAAGCTGAGGTGGAGATTATTAGTCGCATTCATCATCGCCATTTGGTCTCTTTGGTGGGATACTGCATTTTAGATAGCAGAAGGCTGCTCGTCTATGATTATGTCCCCAACAAAACCCTCTATCATCATCTTCATGGGGAAGGTGTGCCAGTGTTGAGCTGGGAAAAACGTGTGAAGATTGCTGCTGGTGCAGCTCGAGGAATTGCTTATCTCCATGAAGATTGCAATCCTCGGATCATTCACAGGGATATCAAGTCCTCAAACATCCTTTTAGATTACAACTTTGATGCTCAAGTCTCAGATTTTGGGCTAGCCAAATTAACCCTTGATACAGTTTCACACATAAGCACTCGTGTCATGGGAACATTTGGATATGTTGCACCTGAATATGCATCAAGTGGCAGATTGACTGAGAAATCTGATGTATTTTCTTTTGGGGTTGTACTTCTGGAGCTCATTACTGGACGGAAGCCTGTAGATGCATCTCAGCCCTTGGGGGATGAGAGCCTAGTTGAATGGGCTCGACCTCTTCTGAGTCATGCAATTGATAGTGAGCAATTTGAAGGTTTAACAGATCCTAAGCTTGAAAAGAACTATGTTGAAATTGAGATGTTTCGCATGATAGAAATTGCTGCAACTTGTGTGCGACATTCGGCTACCAAGAGACCTCGAATGGGACAGGTTGTGAGAGCATTTGATAGCATAACAAATTCAGATTTAAACAACGGGATGAGACCAGGGGAAAGCGAGGCATTCAACTCTGCACAGCAATCTGCAGAGATAAGAATGTTTCGGAGGATGGCATTTGGTAGCCAAGATTACAGCACAGACTTTTTTAGTCAGACAAGTTTGAATTCAACATAG 2265 0.5073 MSVASPSPAAATVPTPPTPSTNSSAPPPATTPPPQSSSLAPPGNSTSPPTSAPPPSSTPSTQSPPPSPPPAQSRPPQASPPPPAVPSPPPAQSRPPQASPPPPSVTPPPLSPPPQSVAPASQPRPPPNATPPTSPVLSPPPSRQSPAPPVSSPPPANSSQPPPSNPSPVPSPPGPSANPPRSSPPPPTPSSNPPQNSPPPPPPTSNPPENSPPPPTSRPPGNSSSPPNTSPPPPVAVPPRGSSPPASAPPVNLPAPAAPRISPPSSQPSPPSNSTPNSPPPPPIVRMAPPPSSLLSPPASQNSSPPSESGTESSNARAKSGIDTGVAVVIGVAGGIIVLTLIGILAWCLIRRQKKRGPESGSYVMPSTSGSLPESDSSFFKTHSSAPLVQSGSGSDTVYTPSEPGGLGNSRTWFTYEELVKATNGFAPQNFLGEGGFGSVYKGYLPDGREIAVKQLKIDGGQGEREFKAEVEIISRIHHRHLVSLVGYCILDSRRLLVYDYVPNKTLYHHLHGEGVPVLSWEKRVKIAAGAARGIAYLHEDCNPRIIHRDIKSSNILLDYNFDAQVSDFGLAKLTLDTVSHISTRVMGTFGYVAPEYASSGRLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSHAIDSEQFEGLTDPKLEKNYVEIEMFRMIEIAATCVRHSATKRPRMGQVVRAFDSITNSDLNNGMRPGESEAFNSAQQSAEIRMFRRMAFGSQDYSTDFFSQTSLNST 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1362 754 Gene3D Phosphorylase Kinase; domain 1 403 501 - -
Lele49g1362 754 MobiDBLite consensus disorder prediction 46 296 - -
Lele49g1362 754 MobiDBLite consensus disorder prediction 362 404 - -
Lele49g1362 754 ProSitePatterns Protein kinases ATP-binding region signature. 432 454 IPR017441 GO:0005524
Lele49g1362 754 SMART serkin_6 426 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g1362 754 MobiDBLite consensus disorder prediction 357 404 - -
Lele49g1362 754 Pfam Protein kinase domain 430 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g1362 754 MobiDBLite consensus disorder prediction 1 317 - -
Lele49g1362 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 546 558 IPR008271 GO:0004672|GO:0006468
Lele49g1362 754 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 333 734 - -
Lele49g1362 754 PRINTS Proline rich extensin signature 3 19 - -
Lele49g1362 754 PRINTS Proline rich extensin signature 30 42 - -
Lele49g1362 754 PRINTS Proline rich extensin signature 69 85 - -
Lele49g1362 754 PRINTS Proline rich extensin signature 48 69 - -
Lele49g1362 754 CDD STKc_IRAK 432 702 - -
Lele49g1362 754 SUPERFAMILY Protein kinase-like (PK-like) 405 697 IPR011009 -
Lele49g1362 754 MobiDBLite consensus disorder prediction 10 39 - -
Lele49g1362 754 MobiDBLite consensus disorder prediction 297 317 - -
Lele49g1362 754 FunFam Proline-rich receptor-like protein kinase PERK8 398 501 - -
Lele49g1362 754 FunFam proline-rich receptor-like protein kinase PERK8 502 713 - -
Lele49g1362 754 ProSiteProfiles Protein kinase domain profile. 426 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g1362 754 Gene3D Transferase(Phosphotransferase) domain 1 502 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1362 Lele-ChrLele49 9530485 9534492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1362 414 704 Receptor kinase-like Gene Family AT5G56890 55.254 2.08e-102 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele49g1362 Pkinase 8.4e-43 CL0016