Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1354 ATGGCTGGGTTGGAAGAGTTGAGGAAAAAACTCGCACCTTTATTTGATGCTGAGAAGGGCCTTTTGACAGGTTCAACCTTGGACCCTTGTGATTCGTACACATTATCAGATGGTGGAACTGTTAACTTGTTGAGCAGCTCATATGGGTTGTACAATATCAACGAGCTTGGACTGCAAAAAGCCATGCATATACCAACACATAGAATTATAGCGTTGAAGAAAATCAATATCTTTGAGAAGGAGAAAAGGCAGCAACTTCTTACTGAAATAAGGACATTATGTGAAGCACCTTGTTACCAAGGTCTTGTTGAATTCCATGGGGCATTCTACACTCCAGACTCTGGACAGATAAGCATAGCGTTGGAGTACATGGATGGAGGATCACTAGCAGGTATCTTAGCAATGCATGGAAAAATACCTGAACCTATTCTTTCAGTCATGTTTCAGAAGCTCCTACATGGGTTAAGCTATCTGCATGGAGTCAGATATTTAGTCCACAGAGACATAAAGCCTGCCAATTTACTAGTAAATCTCAAGGGGGAACCAAAAATTACTGATTTTGGTATCAGTGCTGGCTTAGAGAATTCAGTGGCAATGTGTGCTACTTTTGTTGGAACTGTTACATACATGTCACCTGAGCGAATTCGAAATGATAGCTATTCTTTTCCTGCTGATATATGGAGCCTTGGTCTTGCCCTTCTCGAGTGTGGAACTGGAGAATTCCCATATATAGCTAATGAAGGTCCTGTAAATCTTATGTTGCAGATTCTAGAAGATCCATCACCATCACCATCAAAACATAAGTTTTCACCTGAATTCAACTCCTTTGTAGGTGCTTGCTTACAGAAGGATCAAGATGCCAGGCCAACAGCCGATCAGAATGCTGACATAGATTTAGCTGGGTTTGTGCGAAGTGTCTTTGATCCAACGCAACGAATGAAGGACTTGGCTGATGTAAGTAGCTTGCTTTTTTCACCTGTGATATTGTTGCTTGTGTTTTGCTTATTCTTCAGTTATTTGCAAGATCGAACAAATACAAGTAGGGAAAGTTTCTCTGTGAAGCAATACGTTGGTCCACACGATAATTTTGCGAGACTGTCAAGTATCCGAAGCACGTTAGTCGGCGACTGGCCTCCTGATGCACGCGTTAAAGAGCTTCAATGCCGTGCCCACAGCGAGGATGGAGTCGCGATTAGGGTAGAGGGATTGCCAAGCTTTAAGGATCTTGGAATCGACGTTTCAAGCAGGCGAATGGCTACATTTCATGAACAGTTCATCATAGAACCCACCAATCTCATTGGATGCTACTCCATAGTTAACCAATAG 1326 0.4238 MAGLEELRKKLAPLFDAEKGLLTGSTLDPCDSYTLSDGGTVNLLSSSYGLYNINELGLQKAMHIPTHRIIALKKINIFEKEKRQQLLTEIRTLCEAPCYQGLVEFHGAFYTPDSGQISIALEYMDGGSLAGILAMHGKIPEPILSVMFQKLLHGLSYLHGVRYLVHRDIKPANLLVNLKGEPKITDFGISAGLENSVAMCATFVGTVTYMSPERIRNDSYSFPADIWSLGLALLECGTGEFPYIANEGPVNLMLQILEDPSPSPSKHKFSPEFNSFVGACLQKDQDARPTADQNADIDLAGFVRSVFDPTQRMKDLADVSSLLFSPVILLLVFCLFFSYLQDRTNTSRESFSVKQYVGPHDNFARLSSIRSTLVGDWPPDARVKELQCRAHSEDGVAIRVEGLPSFKDLGIDVSSRRMATFHEQFIIEPTNLIGCYSIVNQ 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1354 441 Gene3D Phosphorylase Kinase; domain 1 57 125 - -
Lele49g1354 441 FunFam mitogen-activated protein kinase kinase 3 126 311 - -
Lele49g1354 441 Pfam Protein kinase domain 60 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g1354 441 Gene3D Transferase(Phosphotransferase) domain 1 126 314 - -
Lele49g1354 441 ProSiteProfiles Protein kinase domain profile. 15 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g1354 441 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 59 294 - -
Lele49g1354 441 SUPERFAMILY Protein kinase-like (PK-like) 60 332 IPR011009 -
Lele49g1354 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Lele49g1354 441 SMART serkin_6 50 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g1354 441 CDD PKc_MAPKK_plant_like 59 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1354 Lele-ChrLele49 9440134 9444506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1354 30 441 MAP Kinase Kinase Gene Family AT5G40440 60.412 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Lele49g1354 Pkinase 5.8e-49 CL0016