Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1341 ATGAGTGAGAGAGAGAGGAGTGTGTTCCAAGACACAATGATGGCATCGTCTTGGAGAAGTGGAAAGGTGGCGGGGCCATATACTTGCATTCTTATTCTTAGCCAACGAGTCTCACAGCGTGGCCTCTGCCTCTGGATGAAAATAGAGGAAGATCAAGGGCACTGTTCTTCATCTTCTCAAGCCATGAATAACATTCAGAGCTATCGAGAACAGCTTCTTCTTCATCAAATGATTCAGCAGCAGCAAAACGCTGACGTTTTGGTAGGTAATTCTTCTAACAATAGTAATAATAACAATACTAACAACGAAAGAGGATCGATGTTCCCTGAGGTTTCTCCAATCTATCATCCGCCGCCGCCGCCACAGACTCCATGGTCTCTCCCTCCGGTTCTCTCGCTCAACCAGGTCCGAGGAGACACCGCCGGCGACCATCAGTTTTTGGTCCCTCCCTCACCTTCTTCCTCTTCGCTCTACGCGGGCTTCTTCAACCGGAGGGTTCCTTCCCAGCAGTTCGCTTACGATGGTCCGTCCAATTCCGATCATCATCACCACCATATCCGGATCATCTCCGACACCCTCGGTGTTGGACCCGTCGTGGGTCAACCGGGCTCAGCTGCTCCCTTCGGCCTCCAAGCCGAGCTGGGCAGGATGACGGCTCAAGAAATCACAGACGCCAAAGCTCTCGCGGCTTCAAGGAGCCACAGCGAAGCCGAAAGAAGACGCCGAGAGAGAATCAACAACCATCTCGCCAAGCTTCGAAGCTTATTGCCCAACACAACCAAATCGTTGTGTGGTAGTTACGAGGAGATAAAAGCAAAGGAACAAATGGAAAAGAGAAATAGCGTTAATGTCGGTTGGTTGGAAAGTATATATACTGAATTTTCTCGTACTTTGTTTCCGTGTGTTGTATGTGATGATGATGTGGACGTAAAGACAGATAAAGCTTCGTTATTAGCAGAAGTAATCGAGCATGTGAAGGAGCTGAAGCGGCAAACTTCAATAATAGCAGAAACCAGCCCAGTGCCGACGGAAACCGACGAGTTGACGGTGGATGACGCTTGCGATGAGGACGCCAGGTTCGTGATCAAAGCCTCGCTTTGCTGCGAAGACAGGTCCGATCTCTTGCCGGACCTCATCAAGACGTTGAAGGCCCTAAGGTTGAGAACCGTCAAGGCAGAGATCACCACGCTCGGCGGACGCGTTAAAAACGTCTTGTTCGTGACCGGCGAAGAAGATGAGTTGAGAGCCGGTGGCAGCCGGGGGGAGGAGAAGAGACAGCATCAGCATTGTATAAGCTCCATACAAGAGGCTTTGAAGGCAGTGATGGAGAAGTATGGTGCTGGTGGTGATGAGAATGGGAATGGGAATGTTAAGAAGCAAAGAACTAATAATAATATCAATATCCTTGAACAAAACAGGTCTTTATGA 1428 0.4944 MSERERSVFQDTMMASSWRSGKVAGPYTCILILSQRVSQRGLCLWMKIEEDQGHCSSSSQAMNNIQSYREQLLLHQMIQQQQNADVLVGNSSNNSNNNNTNNERGSMFPEVSPIYHPPPPPQTPWSLPPVLSLNQVRGDTAGDHQFLVPPSPSSSSLYAGFFNRRVPSQQFAYDGPSNSDHHHHHIRIISDTLGVGPVVGQPGSAAPFGLQAELGRMTAQEITDAKALAASRSHSEAERRRRERINNHLAKLRSLLPNTTKSLCGSYEEIKAKEQMEKRNSVNVGWLESIYTEFSRTLFPCVVCDDDVDVKTDKASLLAEVIEHVKELKRQTSIIAETSPVPTETDELTVDDACDEDARFVIKASLCCEDRSDLLPDLIKTLKALRLRTVKAEITTLGGRVKNVLFVTGEEDELRAGGSRGEEKRQHQHCISSIQEALKAVMEKYGAGGDENGNGNVKKQRTNNNINILEQNRSL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1341 475 Pfam Helix-loop-helix DNA-binding domain 232 328 IPR011598 GO:0046983
Lele49g1341 475 MobiDBLite consensus disorder prediction 88 107 - -
Lele49g1341 475 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 229 328 IPR011598 GO:0046983
Lele49g1341 475 MobiDBLite consensus disorder prediction 449 475 - -
Lele49g1341 475 PANTHER TRANSCRIPTION FACTOR BHLH30 167 468 IPR045847 GO:0003700|GO:0006355
Lele49g1341 475 MobiDBLite consensus disorder prediction 88 111 - -
Lele49g1341 475 MobiDBLite consensus disorder prediction 455 475 - -
Lele49g1341 475 Gene3D - 224 335 IPR036638 GO:0046983
Lele49g1341 475 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 233 335 IPR036638 GO:0046983
Lele49g1341 475 SMART finulus 235 334 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1341 Lele-ChrLele49 9289960 9294184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1341 58 473 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 49.654 1.70e-98 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele49g1341 HLH 2.4e-11 No_clan