Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1331 ATGGGCTTTCGAGAATACATCGAAGCCTTAGAAGATGAACGCCAGAAAATTCAGATGTTCTCTAAAGAACTTCCGCTTTCACTCGAGCTTGTCTCGCAAGCCATTGAAGCTTATAGGCAACAGCTCTTTACAACGACGGAGCACAATTTTTATGGACAATCGGATTGTTCGGAGCAGACGTCAATGGAAGAAGGCCCTGTTCTTGAAGAGTTTATTCCCATTAAGAAAAGGGCTTCCCCTGATTGTGGCGACGAAGACGAACAACATTCGCATGAGCCTAAGATTCTCAAGGACAACAATAATAACAATAAGAACTCTGATAAGAAAAAATCCGACTGGCTCAGATCCGTTCAGCTCTGGAACCCAGATCCCCCTACTAAAGAGGATTTGCCGAGAAAAGCTACGGTGGTGGAAGTGAAGAGAAATGGAGGTGCGTTCCAGCCATTTCAGAGAGAAGACAACAATAATGTTGGGAAGACGAACAATAGCAACACATTGGCTGGTAAATCTCCTCCTCCTGCTCCGGTGCCTGCAATGAGCTCCTCCTCCGGAAACAAGGGATCGGAGGAGAAAGAAGGGCAGGGTCCGAGGAAGCAACGGCGGTGCTGGTCACCTGAATTACATAAACGCTTCTTACAGGCCCTTCAACAACTGGGCGGTCCAGATTCGGCAACTCCAAAACAGATCAGAGAGCTCATGAAGGTCGATGGCCTCACAAACGATGAAGTCAAAAGCCACTTGCAGAAATTTCGGTTGCACACAAGAAGACCAAGTCCTATGATTCACAACAATGCTACATCACAAACAGCTCCATTTGTTCTTGTTGGCAACATTTTTGTGCAACCACCGGAATATGCGGCTGCGGTGGCGACTTCAACAGCATCAGGTGAGGTAACTACGGTCACCACACCGGCCGGGATTTACGCTCCGGTGGTTGCTCATCCCCCTACGGCGGTTCCTCCTATGCCGGTGGGGAAGCAATTGGAGCAGTCACATTCGGATGAAGAAAGGGTGAATCATAGTAGTGAAGGAGCTGTGCATTCAAATTCTTCGCCTGATTCATCGTCTTCCACACACACCACTTCTCCTTCTCATGGATATTGA 1104 0.4801 MGFREYIEALEDERQKIQMFSKELPLSLELVSQAIEAYRQQLFTTTEHNFYGQSDCSEQTSMEEGPVLEEFIPIKKRASPDCGDEDEQHSHEPKILKDNNNNNKNSDKKKSDWLRSVQLWNPDPPTKEDLPRKATVVEVKRNGGAFQPFQREDNNNVGKTNNSNTLAGKSPPPAPVPAMSSSSGNKGSEEKEGQGPRKQRRCWSPELHKRFLQALQQLGGPDSATPKQIRELMKVDGLTNDEVKSHLQKFRLHTRRPSPMIHNNATSQTAPFVLVGNIFVQPPEYAAAVATSTASGEVTTVTTPAGIYAPVVAHPPTAVPPMPVGKQLEQSHSDEERVNHSSEGAVHSNSSPDSSSSTHTTSPSHGY 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1331 367 Pfam Myb-like DNA-binding domain 200 249 IPR001005 -
Lele49g1331 367 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 198 253 IPR006447 GO:0003677
Lele49g1331 367 SUPERFAMILY Homeodomain-like 196 256 IPR009057 -
Lele49g1331 367 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 338 IPR044787 GO:0003700|GO:0006355
Lele49g1331 367 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 195 255 IPR017930 -
Lele49g1331 367 MobiDBLite consensus disorder prediction 343 367 - -
Lele49g1331 367 Gene3D - 197 255 - -
Lele49g1331 367 MobiDBLite consensus disorder prediction 144 202 - -
Lele49g1331 367 MobiDBLite consensus disorder prediction 148 169 - -
Lele49g1331 367 MobiDBLite consensus disorder prediction 77 132 - -
Lele49g1331 367 FunFam Myb family transcription factor 197 255 - -
Lele49g1331 367 MobiDBLite consensus disorder prediction 77 114 - -
Lele49g1331 367 MobiDBLite consensus disorder prediction 318 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1331 Lele-ChrLele49 9149632 9151321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1331 5 358 G2-like Transcription Factor Family AT1G13300 45.378 1.23e-78 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele49g1331 Myb_DNA-binding 1.8e-06 CL0123