Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1299 ATGTTTTTATATCTCTATATAGTCACGAGACCCACTAATGTCAATTTTCTTTTTGTTATTAAATTCAGGAGACCAGAAGAGAACCCATTAGACCTCAACAATTTGCCTGATGACTACCATAGAGATGGCAAACAAGTCCTCGAAGATATCTCCTCATCATCTGGTAAAATTTTCTGTTGCAGGAAAAAGAAAAGCGGCGGCAGGGATGGAAAAGAAGAGTGTGGTAAGGTCTACGAGTGTAGGTTTTGTTCCCTCAAGTTCTGCAAATCTCAGGCCCTTGGAGGTCACATGAACCGTCACCGCCAAGGCTAG 312 0.4231 MFLYLYIVTRPTNVNFLFVIKFRRPEENPLDLNNLPDDYHRDGKQVLEDISSSSGKIFCCRKKKSGGRDGKEECGKVYECRFCSLKFCKSQALGGHMNRHRQG 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1299 103 PANTHER ZINC FINGER PROTEIN JAGGED 56 103 IPR045320 GO:0003700
Lele49g1299 103 ProSiteProfiles Zinc finger C2H2 type domain profile. 78 103 IPR013087 -
Lele49g1299 103 ProSitePatterns Zinc finger C2H2 type domain signature. 80 100 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1299 Lele-ChrLele49 8815245 8816494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1299 22 102 C2H2 Transcription Factor Family AT1G13400 59.259 2.12e-18 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele49g1299 None None None