Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1293 ATGGAGAAAAATTCGTCATCCAATATTCAAGAATTCATGTCTTTCTTCAATGGTTCCTTCTCGGATCAACACCTTAATAATCTCCCTCTTCTCCACACCAATCATCTTAATCCACGGCCTGTTCATAATCATGAAGAAACCTTGCTGGATTCTTCTCCTTCATTTTCTGCACCTTCTTCTGCTCACAAGAACAAGAGCAAAAGGAAGAGAAACAGTGGAAGACTTGAGGTTGAAGAGAAAGCAGAAGATGTCATCCATGTAAGAGCCAAAAGAGGCCAAGCAACTGATAGCCACAGTTTAGCAGAAAGGGTGAGAAGAGAGAAAATCAACGACAAGCTAAGATGTTTGCAAGAATTAGTTCCAGGCTGCTACAAGACAATGGGTATGGCAGTGATGTTAGATGTGATCATAGATTATGTTCAGTCGCTGCAACAACAGATAGAGTTTCTTTCCATGAAGCTTACAGCAGCAACCATGCATTATGATTTCCACGCTTCTGAGTTCAATGTCACCGAAACCTTCCAGAGGAATAATAATAATACGAGTATGGAGAAGATGGGAGAAGAAGGCTATGGTGGAGGATCGTCGTACTCTTTTTTCAATCCAACGTGA 612 0.4118 MEKNSSSNIQEFMSFFNGSFSDQHLNNLPLLHTNHLNPRPVHNHEETLLDSSPSFSAPSSAHKNKSKRKRNSGRLEVEEKAEDVIHVRAKRGQATDSHSLAERVRREKINDKLRCLQELVPGCYKTMGMAVMLDVIIDYVQSLQQQIEFLSMKLTAATMHYDFHASEFNVTETFQRNNNNTSMEKMGEEGYGGGSSYSFFNPT 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1293 203 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 91 162 IPR036638 GO:0046983
Lele49g1293 203 MobiDBLite consensus disorder prediction 179 203 - -
Lele49g1293 203 MobiDBLite consensus disorder prediction 36 78 - -
Lele49g1293 203 FunFam Transcription factor BEE 3 93 156 - -
Lele49g1293 203 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 59 172 IPR024097 GO:0006355
Lele49g1293 203 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 93 143 IPR011598 GO:0046983
Lele49g1293 203 SMART finulus 99 149 IPR011598 GO:0046983
Lele49g1293 203 MobiDBLite consensus disorder prediction 47 61 - -
Lele49g1293 203 Gene3D - 89 162 IPR036638 GO:0046983
Lele49g1293 203 Pfam Helix-loop-helix DNA-binding domain 97 144 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1293 Lele-ChrLele49 8745577 8746638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1293 79 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 66.379 4.23e-51 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele49g1293 HLH 1e-05 No_clan