Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1283 ATGGAAGGACCGTCTGCCCCAGCAATTCGACGAGATCCATATGAGGTATTGTCCGTGTCAAGGGACGCAAATGATCAGGAGATAAAAATCGCTTACAGAAAGCTCGCCCTCAAGTATCACCCTGACAAAAATGCTGACAATCCGGAAGCTTCAGAACTCTTTAAAGAGGTTGCATTTTCATACAGTATCTTGTCTGAACCAGAGAAGAGAAGGCAATATGACAGTGCTGGATTTGAGGCACTTGAAGCAGACAGCATGGACATGGAAGTTGACTTGTCCAATCTTGGAACTGTCAACACAATGTTTGCAGCTTTGTTCAGCAAGCTGGGTGTCCCTATCAAGACCACCATTTCATCTATTGTTCTTGAAGAAGCTCTGAATGGCACAGTTACAGTCAGACCCCTTCCAATGGGAACATCAGTTAGTGGAAAGGTGGAGAAGCAAGGTGCTCATTTCTTTGGCGTGACAATAAATGAGCAGCAGGCTGAGTCAGGAGTTGTAATGAGAGTCACGTCAGCTGCACAAAGCAAATTCAAGTTGCTCTACTTTGAACATGATGCAAATGGTGGCTATGGCTTAGCATTGCAGGAGTTTGCAGATTAG 603 0.4494 MEGPSAPAIRRDPYEVLSVSRDANDQEIKIAYRKLALKYHPDKNADNPEASELFKEVAFSYSILSEPEKRRQYDSAGFEALEADSMDMEVDLSNLGTVNTMFAALFSKLGVPIKTTISSIVLEEALNGTVTVRPLPMGTSVSGKVEKQGAHFFGVTINEQQAESGVVMRVTSAAQSKFKLLYFEHDANGGYGLALQEFAD 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1283 200 SUPERFAMILY Chaperone J-domain 11 83 IPR036869 -
Lele49g1283 200 ProSiteProfiles dnaJ domain profile. 12 77 IPR001623 -
Lele49g1283 200 CDD DnaJ 12 65 IPR001623 -
Lele49g1283 200 Gene3D DnaJ domain 5 95 IPR036869 -
Lele49g1283 200 Pfam DnaJ domain 12 74 IPR001623 -
Lele49g1283 200 PRINTS DnaJ domain signature 69 88 IPR001623 -
Lele49g1283 200 PRINTS DnaJ domain signature 32 47 IPR001623 -
Lele49g1283 200 PRINTS DnaJ domain signature 49 69 IPR001623 -
Lele49g1283 200 PRINTS DnaJ domain signature 14 32 IPR001623 -
Lele49g1283 200 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 8 197 - -
Lele49g1283 200 SMART dnaj_3 11 69 IPR001623 -
Lele49g1283 200 FunFam Chaperone protein dnaJ 16 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1283 Lele-ChrLele49 8652963 8656144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1283 5 84 C2H2 Transcription Factor Family AT1G74250 38.824 2.57e-11 60.1