Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1281 ATGGCGGCAACCCTTTACTTGGCTACCTTATTCTCTACACTTTTCCGTCTTCTTCTTCTTGTTCAGAGCTCCAAAAACCCTGACTTGGAAGCTCTCATGGCGTTTAGAACTGCTTCAGATATGTTCAACAAGCTCTCAACTTGGAACTCCAGCACTGACCCTTGTTCTTCTTGGTCCGGTGTCTATTGCCTCCATAACAGAGTCTCGCGTCTTATTCTCGAAGACCTTGATCTCCGAGGCTCTTTCGAACCCTTGACTTCTCTAACCCAGCTTCGAGTCCTGAGCCTGAAGCGGAACCGCCTCTCCGGCCCCATTCCGAGTCTTTCCAGTTTCACGGCCCTGAAACTTTTGTATCTCTCTTACAATGAGTTTTCCGGTGGCTTCCCGGCGACTGTTACGTCGCTTTTCCTCTTGTACCGTCTTGATCTGTCTCACAATAACTTGTCCGGCGAGATTCCCGCGACGGTCAACCATTTGACCCACATTCTCACTCTCCGTCTACATGAGAACCGTTTCTCCGGCAAAATTCCCAGTCTTGACCTTGCTAACCTGCAAGACTTCAATGTCTCCGGGAATCGTCTCTCCGGTGAAATACCCAAATCACTGTCCGGTTTCCCCGAATCGAGTTTCGCTCTAAACCCGTCTCTTTGCGGAGCTCCGATGCGGAAATGTACCAACTTTGTAGCCGAACCCAGCAAACCCGGATCTGAAGGAGCCATTGCGTCGCCATTAACGCCGCGAAGCAACCCAAGAGCACCAACTATATCATCCACACCGAGCTCAATGCCTGGAAATGACGCAACACCGCCCAGAAAATCCAACTCATCAGCAAAAATAAGCCCCATAGCGCTAGTAGCCATTATTCTCGGCGACATTGTGGTTCTCGCAGTGGTCTCTCTTCTTCTCTACTGCTACTTCTGGCGAAACTACGCTGGGAAATTGAAAGAAGGAAAAGGTTCGAAGCTAATGGAGAGCGAAAAAATCGTGTATTCATCAAGCCCGTATCCTGTTCAATCGGGTTTTGAGAGGGGTCGAATGGTGTTTTTCGAAGGGGTGAAGAAGTTCGAGCTAGAGGATTTGCTTAAAGCTTCAGCAGAAATGTTGGGAAAAGGTGGTTTCGGGACGGCATATAAGGCGGTTCTGGATGATGGAAGCGTCGTCGCTGTCAAGAGGCTCAAAGACGCTCAGATTGGAGGGAAGAAAGAGTTCGAACAACACATGGAAATTTTAGGAAAATTGAGACACCAAAACATTGTTCATTTGAGAGCTTACTATTCTGCTAGAGACGAGAAGTTGCTCGTCTCTGATTACATGCCCAAGGGAAGCTTGTTCTGGCTTCTTCATGGTAACAGAGGCCCTGGCCGGACCCCACTGGAATGGACCACAAGGCTTAAAATAGCAGCCGGAGCGGCGCGTGGAGTTGCTTTTGTTCACAGCTCATGCAAGACGCTTAAGCTCACCCACGGTAACATCAAATCCACAAACATCCTCCTCGACAGGGCGGGAAATCCGCGCGTGGCAGATTTCGGGCTCTCCATCTTTGCTGGCCCAACGGCCACAGCCGCTCCGAAATCCAGCGGCTACCGTGCTCCTGAGGCATTTGACGGTCGGAGATGCACTCAGAAATCCGACGTGTACTCCTTTGGCGTCGTCCTGCTGGAGATTCTCACCGGGAAATGCCCCTCCGCCGTGGACAGCGGCGGGTATGGTGGTAGCGCGGTGGTGGATCTTCCGAGGTGGGTACAGTCGGTGGTGAGGGAGGAATGGACGGCGGAGGTGTTCGATCTTGAGCTGATGAGGTACAAAGACATTGAGGATGAGATGGTGGGGCTGCTTCAGATTGCTCTGGCTTGTACCGCCGCTGCGCCTGATCAACGGCCCAGCATAAGCCACGTGGTCAAGATGATCGAGGAGATTCGTGGGGTCGAGGGGGAACCAGGTCATGACACGTCGGACTCTGTTTCTGATTCCCCTTCCGTGTCTGAAGATGCTTCTTGA 1998 0.516 MAATLYLATLFSTLFRLLLLVQSSKNPDLEALMAFRTASDMFNKLSTWNSSTDPCSSWSGVYCLHNRVSRLILEDLDLRGSFEPLTSLTQLRVLSLKRNRLSGPIPSLSSFTALKLLYLSYNEFSGGFPATVTSLFLLYRLDLSHNNLSGEIPATVNHLTHILTLRLHENRFSGKIPSLDLANLQDFNVSGNRLSGEIPKSLSGFPESSFALNPSLCGAPMRKCTNFVAEPSKPGSEGAIASPLTPRSNPRAPTISSTPSSMPGNDATPPRKSNSSAKISPIALVAIILGDIVVLAVVSLLLYCYFWRNYAGKLKEGKGSKLMESEKIVYSSSPYPVQSGFERGRMVFFEGVKKFELEDLLKASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDAQIGGKKEFEQHMEILGKLRHQNIVHLRAYYSARDEKLLVSDYMPKGSLFWLLHGNRGPGRTPLEWTTRLKIAAGAARGVAFVHSSCKTLKLTHGNIKSTNILLDRAGNPRVADFGLSIFAGPTATAAPKSSGYRAPEAFDGRRCTQKSDVYSFGVVLLEILTGKCPSAVDSGGYGGSAVVDLPRWVQSVVREEWTAEVFDLELMRYKDIEDEMVGLLQIALACTAAAPDQRPSISHVVKMIEEIRGVEGEPGHDTSDSVSDSPSVSEDAS 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1281 665 Pfam Protein kinase domain 366 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g1281 665 SUPERFAMILY L domain-like 36 205 - -
Lele49g1281 665 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 642 - -
Lele49g1281 665 MobiDBLite consensus disorder prediction 247 275 - -
Lele49g1281 665 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 438 647 - -
Lele49g1281 665 CDD STKc_IRAK 368 639 - -
Lele49g1281 665 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Lele49g1281 665 MobiDBLite consensus disorder prediction 233 275 - -
Lele49g1281 665 SUPERFAMILY Protein kinase-like (PK-like) 366 637 IPR011009 -
Lele49g1281 665 ProSiteProfiles Protein kinase domain profile. 362 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g1281 665 Gene3D Transferase(Phosphotransferase) domain 1 438 655 - -
Lele49g1281 665 Gene3D Ribonuclease Inhibitor 20 111 IPR032675 -
Lele49g1281 665 Gene3D Ribonuclease Inhibitor 112 224 IPR032675 -
Lele49g1281 665 FunFam Nuclear pore complex protein NUP107 25 178 - -
Lele49g1281 665 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Lele49g1281 665 FunFam pollen receptor-like kinase 1 335 437 - -
Lele49g1281 665 MobiDBLite consensus disorder prediction 640 665 - -
Lele49g1281 665 Gene3D Phosphorylase Kinase; domain 1 338 437 - -
Lele49g1281 665 MobiDBLite consensus disorder prediction 651 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1281 Lele-ChrLele49 8636073 8638790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1281 28 664 Receptor kinase-like Gene Family AT1G68400 65.538 0.0 816
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele49g1281 Pkinase 1.8e-38 CL0016