Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1278 ATGGCTTCTGGTGGAGGCAGGCGTCACCGCCATAATCTTGTGCCTCTTGCTGCATTGATAAGCAGGGAGATTAAGAGTGAGAAGATGGAGAAGCCCACTGTGAGGTATGGACATGCTGCTCAGTCTAAGAAAGGGGAGGATTACTTTTTAATAAAGACCAATTGTCAGCGCATACCTGGCAATTCTTCATCAGCGTTTTCTGTATATGCGATCTTTGATGGTCACAATGGAAATGCGGCAGCAATTTTTAGCAGGGAAAATTTGTTAAATCACATTCTGGGTGCTCTTCCTCGAGGTATTGGAAGAGAGGAGTGGCTTCAGGCATTACCTAGGGCATTGGTTGCTGGGTTTGTGAAGACTGACAAGGAGTTTCAGAGCAGAGGAGAAACTTCTGGCACCACAGCCACGGTTGTGATAGTTGATAGATGGACTGTGACGGTTGCATCAGTTGGAGATTCCCGTTGTATACTAGACACCCAAGGTGCCCCTATTACCAACTTAACTGTTGATCACAGACTTGAAGAGAATATTGAAGAGAGAGAGCGTGTTACTGCAAGTGGAGGTGAAGTTGGAAGGCTTAGTATTTATGGTGGTGCTGAGATTGGTCCCCTTCGTTGTTGGCCAGGGGGTCTGTGCCTTTCTAGGTCAATTGGAGATGTGGATGTGGGGGAGTTTATAGTTCCAATACCATATGTCAAACAAGTGAAGCTTTCAAAAGCTGGTGGGAGGCTTATAATTGCTTCAGATGGCATCTGGGATGCTCTATCGTCTGAAATGGCTGCAAAATCTTGTTGGGGTTTGCCTGCTGAACTTGCTGCTAGGCAAGTTGTGAAGGAAGCATTAAGGACAAGAGGTTTAAAGGACGATACAACTTGCATAGTAGTTGACATAATTCCTCCTGATAATGGATTGCCACCGCCTCCTCCCCCCAAAAAGCAGAGTAAATTGAGAGCTTTACTATTCAGGAAGAAATCCAGTGATTCCGCTAGTAAGCTGTCGAAGAGGCTTTCGGCTGTTAATATAGTAGAGGAACTGTTTGAGGAAGGATCAGCGATGCTCGCTGAAAGATTAGGGAATGAAGGGAATTCAGGGGAATCATCAGCCTCAGGGATATTTGTGTGCGCAGTGTGCCAGATAGATCTTGCTTCAAGTGAAGGCATATCTGTTCATGCTGGTTCCATTTTCTCTACCACCTCTAAGCCATGGCAAGGCCCTTTTCTTTGTGCTGATTGTCGCAACAAGAAGGACGCAATGGAAGGCAAGCGTCCTAGTGGAATTAGAGTCTGA 1287 0.4592 MASGGGRRHRHNLVPLAALISREIKSEKMEKPTVRYGHAAQSKKGEDYFLIKTNCQRIPGNSSSAFSVYAIFDGHNGNAAAIFSRENLLNHILGALPRGIGREEWLQALPRALVAGFVKTDKEFQSRGETSGTTATVVIVDRWTVTVASVGDSRCILDTQGAPITNLTVDHRLEENIEERERVTASGGEVGRLSIYGGAEIGPLRCWPGGLCLSRSIGDVDVGEFIVPIPYVKQVKLSKAGGRLIIASDGIWDALSSEMAAKSCWGLPAELAARQVVKEALRTRGLKDDTTCIVVDIIPPDNGLPPPPPPKKQSKLRALLFRKKSSDSASKLSKRLSAVNIVEELFEEGSAMLAERLGNEGNSGESSASGIFVCAVCQIDLASSEGISVHAGSIFSTTSKPWQGPFLCADCRNKKDAMEGKRPSGIRV 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1278 428 Pfam Protein phosphatase 2C 57 264 IPR001932 -
Lele49g1278 428 PANTHER PROTEIN PHOSPHATASE 36 296 - -
Lele49g1278 428 SMART PP2C_4 27 295 IPR001932 -
Lele49g1278 428 CDD PP2Cc 36 297 IPR001932 -
Lele49g1278 428 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Lele49g1278 428 SUPERFAMILY PP2C-like 36 297 IPR036457 -
Lele49g1278 428 FunFam probable protein phosphatase 2C 5 35 302 - -
Lele49g1278 428 Gene3D - 33 301 IPR036457 -
Lele49g1278 428 SMART PP2C_SIG_2 46 297 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1278 Lele-ChrLele49 8615932 8619013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1278 1 428 PP2C-type Phosphatase Gene Family AT1G68410 77.294 0.0 680