Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele49g1276 | ATGATTAGTAATGGTAAATCTCATGGTGGTAATCAAAGTTCCATAGGTGTCATCTGCAAAGCAGGTGCTGGAGCTGCTGCGGGTAAGTTTGTCAATTTTGAGTTCAGTTTTACTGCGATAATGTTGTTTTCTACATTTCTCATTCAAAGCGCTGAGGTACAAGGAATGAGGTCACATGTTGTTCCGTACAAAAGCATTCTTTCTGCTTTGAAGAGGATAATGCACGAGGAAGGCATACGAAGACTGTATAGGTGTGGGTTTAGGTTGAGCTTGAGAATGAATCCTATTGAGATGCTTTGCTTTTTGAGGACTAGAAATTTAAAGGATGGCATAGTGCCTTCCTTGGCTGGTGTAAGTCATATTGCAATTCAGTTCCCTGCGTATGAAAAGATCAAATCATACATGGCGGAAAAGGATGATACGACCGTTGACAAACTTGGTCCAGGAAAGGTTGCCATTGCATCCTCAATTTCAAAAGTCATTGCTCTATAA | 492 | 0.4065 | MISNGKSHGGNQSSIGVICKAGAGAAAGKFVNFEFSFTAIMLFSTFLIQSAEVQGMRSHVVPYKSILSALKRIMHEEGIRRLYRCGFRLSLRMNPIEMLCFLRTRNLKDGIVPSLAGVSHIAIQFPAYEKIKSYMAEKDDTTVDKLGPGKVAIASSISKVIAL | 163 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele49g1276 | 163 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 15 | 110 | IPR018108 | - | |
| Lele49g1276 | 163 | SUPERFAMILY | Mitochondrial carrier | 59 | 110 | IPR023395 | - | |
| Lele49g1276 | 163 | Gene3D | Mitochondrial carrier domain | 2 | 163 | IPR023395 | - | |
| Lele49g1276 | 163 | PANTHER | MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED | 105 | 162 | IPR044712 | GO:0006862|GO:0055085 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele49g1276 | Lele-ChrLele49 | 8607254 | 8609662 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele49g1276 | 53 | 162 | Chloroplast and Mitochondria Gene Families | AT1G25380 | 55.455 | 3.94e-32 | 115 |