Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1272 ATGTACGTCCCACACTTCGATTTATTGTTTTTACGGCTTTTACTTTTTCTCATACTTTCCCAACTATGTTCATGTTCTCAAAATCCTTTGGAATTTGCTGAACCTTGTTCGACAGCAGTTTCTGCCGGTGTCAATTTCTCATTAAGTTGGGGGCACGCAAGGATTCAATTGGCCAACCTGGAAGATCAACATAACTTTCAACAGAGAGCACTATTGCCTACCCTACTTCTTATTTTCTTTCAGTTTCGTTTCCTCTTGTTTTCTCACCTTTTACTTCTTTCAGTTTGGTATGGAAATGCAAGGCATGTTAAGTGTCCTAGATCTTTTAATTGCGGAGAACTTGGGAGCCTCCAGTTCCCTTTCACCAAGCCAGAATTGCCATACTGTGGCTTAATGGTGGTTCATAACTGTGATGATTTGAATCTACATTCAATTAAAACGATTGAACTAGAGAAGAATGGAAGATCATTCTTGCAGCTTAACGGTGTTTTTCTGCAGCAAAATATGATTACGGTTTTTGACCAAGATCTACACAATCGTTTGCAATCCAGTGGTTCTTGTCAAGCTTTCAACAAAAGCATCCCAATTCCTGCAAGCTCTCCTTTGATCTCTTTTGATATTAAATACAACATAACCCTGTTTAAATGCGACCACAAAATCAATGTCAGCGCCCCCTCTGGTTTTATTAAACATCCTTGTGAAAACTTCGATATGTATCATTACAGCCTACTCCATGATCTTCAACCTGACAAAAAAAGCCATTTCTCAGCATGTACAACTCTAGTGCTTCCAAAAAAAGACCTGCCTGATAGCAAAGACCTTCAGTCGTTCTTATCTGCTCAAATGACTCTGGATATACGACTATCTGATGCTTGTGATAAGTGTCGCAACAGCAGAGGGCAGTGTCAACTTGACAGAAACAAGAACTTCTGCATCGAAGCTGCACCTTATAGGAGTAAAATTTGGAAGCTGGCACTGGGACTTGGGCTAGGTTCATTTATTGGACTTCTAGGCATTTTGATAAGTTGTTGGCTACTAGGGCGGTATTACAAACAAAAATATTCATCTTCAAACGTCCAATTGCAATTAACGAGAAATAATTCAATTGATTCCTACCCTAATGCAGACCCAGAAAGGAGCAGAACCTACTTGGGGGTACCCCTGTTCTCTTACAAGAAGCTTGAGAAAGCAACAAATAACTTCAGTCATTCAAGAGAATTGGGAAATGGAGGATTTGGGTCTGTTTACTATGGAAAACTCGAAGATGGACGTGAAGTTGCAGTTAAGCGCCTATATGACCACAACTATTGGAGAGTAGAACAATTCATGAATGAAATTGAGACTCTAACTCGCTTGCGCCATCAAAACCTTGTGTCCCTTTATGGTTGCACATCATGTCATAGCCGTGAACTCCTCCTTGTGTATGAATACATTCCAAACAAAACAGTTTCTTGTCATCTCCATGGTGAATTAGCTGATTCTGGTTTACTACCATGGCCTAGAAGAATCAAAATTGCCATACAAACTGCAACCGCTTTGGCTTTCCTCCATGATTCCAACACCATTCATCGGGATGTCAAAACTAACAATATCCTTCTTGACGACAACTTCTCAGTTAAGGTTGCAGATTTTGGGCTTTCGAGGTTGTTTCCTGATGATGTTACCCATGTTTCCACTGGCCCACAAGGGACCCCTGGTTATGTTGATCCAGACTATCAACAATGTTACCAGCTTACTAGCAAAAGTGATGTGTATAGCTTTGGGGTTGTGCTTATTGAGCTGATATCATCTATGCCAGCAGTTGATAAGAGCAGGCCTAGAGATGAGATAAATCTGGCAAATCTAGCTGTAAGTAAGATTCAGAAGAGTGCATATGAGGAGTTGGTGGATCCTTGTCTTGGTTTTGAGTCAGACAAAGAGGTGAGGAGGATGATAGTTTCAGTGGCAGAGTTGGCTTTTCAATGTTTACAAAGGGACAAGGAATTGAGACCTTCCATGGATGAGGTTTTGGAGATTCTAAAGAGAATTGAGATTGGGAATGGGAAGTTTGATCATCTTGAAGAAGTGGATAGTCATCGTGCTGTCGGTATATTACATAGCGGTCCTATTCATACGCCATCATCACCACCTTCACCGGATTGTGTTGATACTGGATTGCCGAAGAGTATGAAGTCATTGCCTTCACCTAAAGCCGTTAATGATAAATGGCATAGTGAATCAACTACAACTCATGGAAGTGTCTAA 2244 0.4073 MYVPHFDLLFLRLLLFLILSQLCSCSQNPLEFAEPCSTAVSAGVNFSLSWGHARIQLANLEDQHNFQQRALLPTLLLIFFQFRFLLFSHLLLLSVWYGNARHVKCPRSFNCGELGSLQFPFTKPELPYCGLMVVHNCDDLNLHSIKTIELEKNGRSFLQLNGVFLQQNMITVFDQDLHNRLQSSGSCQAFNKSIPIPASSPLISFDIKYNITLFKCDHKINVSAPSGFIKHPCENFDMYHYSLLHDLQPDKKSHFSACTTLVLPKKDLPDSKDLQSFLSAQMTLDIRLSDACDKCRNSRGQCQLDRNKNFCIEAAPYRSKIWKLALGLGLGSFIGLLGILISCWLLGRYYKQKYSSSNVQLQLTRNNSIDSYPNADPERSRTYLGVPLFSYKKLEKATNNFSHSRELGNGGFGSVYYGKLEDGREVAVKRLYDHNYWRVEQFMNEIETLTRLRHQNLVSLYGCTSCHSRELLLVYEYIPNKTVSCHLHGELADSGLLPWPRRIKIAIQTATALAFLHDSNTIHRDVKTNNILLDDNFSVKVADFGLSRLFPDDVTHVSTGPQGTPGYVDPDYQQCYQLTSKSDVYSFGVVLIELISSMPAVDKSRPRDEINLANLAVSKIQKSAYEELVDPCLGFESDKEVRRMIVSVAELAFQCLQRDKELRPSMDEVLEILKRIEIGNGKFDHLEEVDSHRAVGILHSGPIHTPSSPPSPDCVDTGLPKSMKSLPSPKAVNDKWHSESTTTHGSV 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1272 747 SUPERFAMILY Protein kinase-like (PK-like) 384 674 IPR011009 -
Lele49g1272 747 ProSitePatterns Protein kinases ATP-binding region signature. 407 429 IPR017441 GO:0005524
Lele49g1272 747 SMART serkin_6 401 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g1272 747 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 82 740 IPR044652 GO:0004672
Lele49g1272 747 MobiDBLite consensus disorder prediction 698 747 - -
Lele49g1272 747 FunFam Wall-associated receptor kinase-like 20 478 684 - -
Lele49g1272 747 Pfam Protein tyrosine and serine/threonine kinase 404 673 IPR001245 GO:0004672|GO:0006468
Lele49g1272 747 Gene3D Transferase(Phosphotransferase) domain 1 478 684 - -
Lele49g1272 747 Gene3D Phosphorylase Kinase; domain 1 374 477 - -
Lele49g1272 747 ProSiteProfiles Protein kinase domain profile. 401 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1272 Lele-ChrLele49 8569202 8573476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1272 107 747 Receptor kinase-like Gene Family AT1G25390 46.605 7.23e-171 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lele49g1272 PK_Tyr_Ser-Thr 7.9e-45 CL0016