Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1259 ATGGAGGCGCCCCCTCCTCCGCTCACTGCTCCGCCCCCCTCCGCCGTCGTCACTCCGCCGATGGCACCCTCTCACCTCAACTACCCTGACTCTGTTGATTCTTCGCCCCGTTCCCGCAACGCTGACTCTTGGGATGACCCTTTCCCTCCCGCTGCTGCCTCCTCCAAGCTCCGCCTCATGTGTAGCTATGGCGGTCACATCGTCCCTCGCCCTCACGACAAGTCTCTATGTTATGTTGGTGGCGATACTCGTATCGTAGTCGTTGACCGGAACACCTCTCTCTCCGATTTGTCTTCGCGACTCTCTAAAACCTTCCTTAATGGTCGTCCCTTCACTTTCAAATACCAGCTTCCCAGTGAAGACCTCGATTCCTTAATTTCTGTCACTACCGATGAAGATTTTGATAATATGATCGATGAGTACGATCGAACTGCTTCGAATTCGTCGGTTAAGCCTTCCAGAATCCGCCTCTTCTTGTTCCCGACGATGCCTGAATCGTCTCAATCGATTGGGCCTATACTTGATAATTCGGCTAAATCGGATGACTGGTTCCTGAACGCGCTAAACGGCACAGGAGTGCTCAACAGAGGGTTTTCTGAGTCCGGTTCGGTAAATTGCTTGCTGAGTCTCGATGATGACGCTGGTGGTAATAACCTGGACTCGGTTTCTAGGGAAAATGAAGTTGCTCAACAATCTGGATCTTTCGGGAATGGCAAGAATGTGACGAAGCAAGGACAGGATGTTCACTCTGTGGCTGATTCCCCTATGCTGGAAACGACTTCGTCTTTTGGGTCTACTTCTTCGTCACCTTCGCTGGCGAATTTGCCGCCGATTCGGGTTCATGTGGTGGATGATAGTAGTGTTAGGATGCAGGATCAGAAAGCGGTCGGAATTGAGGATCAGTTTGCTCAAATGGGTGTTAGTGGTGGTGGTGGGCAGAGGCAGGATGAGGGGTTTTTTGTTCTGTCTCCTTCTCCTCCTCTGATGCCGGCAACCATCACAACCCCGATGGTTGTGCCGATTAGCGCTGCTGTTGCTTCAGGCGGCGAATACCAGAATCGGGTTTTCTCCGACGATGAGAGATCAGACCACGGAGTCCCTGTGGGTTACAGAAAACCTGCGACACAGCAACCACAACCACAGCCTCAGCCTCAGAATCTGCCTCCTCAATTTCAACAGAAGTCAGCCGGCGTTGTTGATTTGCCTTCCCCAGATTCAGTTTCAAGCGATGGTAGTCTTTCAAATCCATTGTCACGCCCAAAGCCTGTACTCTATCAAGAACAAGTTCAAATTCCCGCTGTGACCACAAGGGTTCCTAGTAATCCTGCTGATCCAGTAAAGCTTAATATGTCTGATCCTCACACTCGGATCCAGATACAGCAACAGGTGCAGGACCCTGGATATGTATTGCAACGACAATTTGATCCCCAGCAACAGGACCCTGGATATGTATTGCAACGACAATTTGATCCCCAGCAACAACCTCAACAGCAGCAGAAGCCGCAATATATACCAAATTCCCATTTCATTCACCATGCTCCTGCTGGAGCCGTGCCAATCCCGGCATACTATCCTGTATATCCTTCCCAGCAACAATCTCATCCTCAGCATCACCCTCAGCTTGATCAGCAATACCCAGTTTACTACATGCCTGCAAGACAGGCCCAGCCTTACAACTTACCGATGCAGCAGCAGCAGCAGCAGCAACCTAGTATTGGTGAAACCAACACAGCCGTCCCTTCTAGCCGAACCCAAGCTCAGCCAAATCCGGCAATGGCTCCATCATCTGCAGCTTACAATCCTGTAAGAAATGTTCCCATTCCAAAGGCTGAAATGGCTGCTGGCGCATACAGAACAAGTGCAGGAATCCCCCAATTAGTTCAAGTCCCTTCTACTCAGCCTCAGCATCAGCAACAATTTGTTGCTTACTCTCAGATTCATCATCCCTCTCAGACTGTTGCCACCAATTCTGCTGCCCCGGAAAATTATGCTTATGACTATGCTGATGCGGCTCATGCTCAGATATACTACACCCAACCTTTGGCTCCTACCATGCCTTCACAATACCAAACCATGGCAGCTCCAGCTGTTGTGCCGCCAGAAGTTTCTTCTCAGCTTCCTTCTGATAGCATAAAGCAGCAGATAAGAACCTCACAGCCAATATAA 2166 0.5018 MEAPPPPLTAPPPSAVVTPPMAPSHLNYPDSVDSSPRSRNADSWDDPFPPAAASSKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVDRNTSLSDLSSRLSKTFLNGRPFTFKYQLPSEDLDSLISVTTDEDFDNMIDEYDRTASNSSVKPSRIRLFLFPTMPESSQSIGPILDNSAKSDDWFLNALNGTGVLNRGFSESGSVNCLLSLDDDAGGNNLDSVSRENEVAQQSGSFGNGKNVTKQGQDVHSVADSPMLETTSSFGSTSSSPSLANLPPIRVHVVDDSSVRMQDQKAVGIEDQFAQMGVSGGGGQRQDEGFFVLSPSPPLMPATITTPMVVPISAAVASGGEYQNRVFSDDERSDHGVPVGYRKPATQQPQPQPQPQNLPPQFQQKSAGVVDLPSPDSVSSDGSLSNPLSRPKPVLYQEQVQIPAVTTRVPSNPADPVKLNMSDPHTRIQIQQQVQDPGYVLQRQFDPQQQDPGYVLQRQFDPQQQPQQQQKPQYIPNSHFIHHAPAGAVPIPAYYPVYPSQQQSHPQHHPQLDQQYPVYYMPARQAQPYNLPMQQQQQQQPSIGETNTAVPSSRTQAQPNPAMAPSSAAYNPVRNVPIPKAEMAAGAYRTSAGIPQLVQVPSTQPQHQQQFVAYSQIHHPSQTVATNSAAPENYAYDYADAAHAQIYYTQPLAPTMPSQYQTMAAPAVVPPEVSSQLPSDSIKQQIRTSQPI 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1259 721 MobiDBLite consensus disorder prediction 218 247 - -
Lele49g1259 721 MobiDBLite consensus disorder prediction 703 721 - -
Lele49g1259 721 Gene3D - 76 160 - -
Lele49g1259 721 MobiDBLite consensus disorder prediction 405 421 - -
Lele49g1259 721 Pfam PB1 domain 72 161 IPR000270 GO:0005515
Lele49g1259 721 SUPERFAMILY CAD & PB1 domains 72 169 - -
Lele49g1259 721 ProSiteProfiles PB1 domain profile. 56 162 IPR000270 GO:0005515
Lele49g1259 721 MobiDBLite consensus disorder prediction 219 247 - -
Lele49g1259 721 CDD PB1_UP2 60 160 - -
Lele49g1259 721 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 76 162 - -
Lele49g1259 721 MobiDBLite consensus disorder prediction 1 47 - -
Lele49g1259 721 SMART PB1_new 71 162 IPR000270 GO:0005515
Lele49g1259 721 MobiDBLite consensus disorder prediction 561 594 - -
Lele49g1259 721 PANTHER OS05G0427100 PROTEIN-RELATED 27 567 - -
Lele49g1259 721 MobiDBLite consensus disorder prediction 699 721 - -
Lele49g1259 721 MobiDBLite consensus disorder prediction 561 597 - -
Lele49g1259 721 MobiDBLite consensus disorder prediction 1 19 - -
Lele49g1259 721 MobiDBLite consensus disorder prediction 357 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1259 Lele-ChrLele49 8464404 8466734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1259 56 205 MAP Kinase Kinase Kinase AT3G46920 39.869 7.38e-26 112