Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1245 ATGTCGCTCTCTCTCTTACCAACTCTTCCTTCTTCTTCTTCCTCTTCCCTCCACCCCCATGCACACTTTAGCCCTTCCCTTCGTTCCATGTCTATTCTACGCTGCCTAGCCCATCGCTTCCCTCGCCACGTAAACCTCCGACGCCATCGCTTCGCTTCCGTCGCTGCCGCCGCTGTTAGGCAGGATACCACCGTCTGGACTCCTGCCCCACTCTCCGAGGTTGAACCTGCCGCCGAGTCCCTCTTTCACGTCACTGTCGATTTGTCCGACTCGCCTTATTTGGCAACATCTCACACCCGGGCCGGGCAGTACATCCAGTTGCGAGTTCCTGACGCCTCCAAGCCTTCCTTCCTTGCCATCGCGTCGCCTCCGAAGCTCGCTTCGGCGCATGGCGTGTTCGAGTTTCTTGTGAAGAGCGTGCCGGGATCTCCCGCTGAGATTCTATGCGGGTTGAAGAAAGGGACTGTGGTGGAACTGAGTCAGGTTATGGGGAATGGGTTCCATACGAGTCGGATAGATCCGCCTGAGAAATATGCGACGGTTTATATTTTTGCGACTGGATCCGGAATCAGTCCAATTCGATCACTTATTGAGTCTGGATTTAGTGCTGCTGAGAGATCTGATGTGAGGCTTTATTACGGGGCTACAAACCTTCAAAGAATGGCTTATCAGGATAGATTCAAAGACTGGGAATCTTCTGGTGTTAAGATTGTGCCTGTCTTGTCTAAACCAGATGTTAGTTGGAATGGGGAAAGTGGCTATGTGCAGGCTGCTTTTACAAGAACCAAGCAAATTACTAATCCTCTGTCAACCGGTGCTGTACTTTGTGGGCAGAAACAGATGACTGAGGAAATGACATCTATTCTTATTGCTGATGGAGTCTCAAGTGATAAGATATTGAAAAACTTCTGA 912 0.5055 MSLSLLPTLPSSSSSSLHPHAHFSPSLRSMSILRCLAHRFPRHVNLRRHRFASVAAAAVRQDTTVWTPAPLSEVEPAAESLFHVTVDLSDSPYLATSHTRAGQYIQLRVPDASKPSFLAIASPPKLASAHGVFEFLVKSVPGSPAEILCGLKKGTVVELSQVMGNGFHTSRIDPPEKYATVYIFATGSGISPIRSLIESGFSAAERSDVRLYYGATNLQRMAYQDRFKDWESSGVKIVPVLSKPDVSWNGESGYVQAAFTRTKQITNPLSTGAVLCGQKQMTEEMTSILIADGVSSDKILKNF 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1245 303 PANTHER - 12 303 - -
Lele49g1245 303 SUPERFAMILY Riboflavin synthase domain-like 62 168 IPR017938 -
Lele49g1245 303 Gene3D - 176 303 IPR039261 -
Lele49g1245 303 Pfam Oxidoreductase NAD-binding domain 185 284 IPR001433 GO:0016491
Lele49g1245 303 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 64 169 IPR017927 GO:0016491
Lele49g1245 303 CDD FNR_like 72 300 - -
Lele49g1245 303 PRINTS Phenol hydroxylase reductase family signature 182 201 - -
Lele49g1245 303 PRINTS Phenol hydroxylase reductase family signature 207 216 - -
Lele49g1245 303 PRINTS Phenol hydroxylase reductase family signature 99 111 - -
Lele49g1245 303 MobiDBLite consensus disorder prediction 1 20 - -
Lele49g1245 303 Gene3D Translation factors 59 164 - -
Lele49g1245 303 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 174 300 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1245 Lele-ChrLele49 8340671 8344388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1245 102 297 NADPH P450 reductases AT5G17770 24.171 1.37e-06 47.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g1245 49 8340671 8344388 Lele49g1245 49 8340671 8344388 ECH
Lele49g1245 49 8340671 8344388 Lele51g1263 51 8362267 8365716 hybridization
Lele49g1245 49 8340671 8344388 Lele52g1534 52 19355416 19359547 hybridization