Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1219 ATGCTTGATGGGGAGGTACCGAGCAAAGGTATCTTTGGCAATGCAAGTGCAATATCACTTATGGGGAATAACATGCTTTGTGGAGGCATATCAGAGTTGGAGCTACCACCATGCCCTATCAAATCCACAGGACAAAGAAAACATAAAAACTTCAAGTTGATCGTATCAATCTGTTGTGTGATTGTTTTTCTTCTTCTAGCATCTGTTGTTGCTACTTATCATGGGAGGAAAAGAAACAAGAAATCTTCTTCAAGCTATATACCTCCAGAATATGGAATTGGTTCAGAGGTATCAATACAAGGTGACATGTATAGTTTTGGCATTCTTGTCTTAGAGACGTTAACTAAAAGAAGACCCACTGAAAGTATGTTTAATGATGGTGAGAATCTTCAAACTTATGTAAAAAACGCATTTCCAAACAAATTTTTGGAAGTTGTGAGCCCAACCATTCTTCCTCAGGAATTAGAACATATAGTGGGAGCAACAGGAGACTTGTCGGAGAACATGAAGCAAATCCATCCTAATGTTGAGAAATGCTTGCGTTCTTTATTTGAGATTGGTCTTACATGTTCAATGGAGTCACCTCATCAAAGAATGAGTGCAATTGATGTCATCAGGGAGCTAAATTCTATCAAAAGTTTTTTTCCTCTATGGTAA 657 0.3775 MLDGEVPSKGIFGNASAISLMGNNMLCGGISELELPPCPIKSTGQRKHKNFKLIVSICCVIVFLLLASVVATYHGRKRNKKSSSSYIPPEYGIGSEVSIQGDMYSFGILVLETLTKRRPTESMFNDGENLQTYVKNAFPNKFLEVVSPTILPQELEHIVGATGDLSENMKQIHPNVEKCLRSLFEIGLTCSMESPHQRMSAIDVIRELNSIKSFFPLW 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1219 218 ProSiteProfiles Protein kinase domain profile. 1 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g1219 218 SUPERFAMILY Protein kinase-like (PK-like) 79 213 IPR011009 -
Lele49g1219 218 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 86 213 - -
Lele49g1219 218 Gene3D Transferase(Phosphotransferase) domain 1 47 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1219 Lele-ChrLele49 8167955 8169581 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1219 81 215 Receptor kinase-like Gene Family AT3G47570 40.000 3.53e-24 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele49g1219 None None None