Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1215 ATGAGGAAGCCTTGCTGTGATAAGCAAGACATGAACAAAGGAGCTTGGTCTAAACAAGAAGACCAGAAACTCATTGATTACATCAAGAAACATGGCGAAGGTTGCTGGCGTACTCTTCCTCAAGCCGCAGGATTACTTCGCTGCGGCAAGAGTTGCAGGCTGAGGTGGATAAATTATCTAAGGCCAGACCTTAAAAGAGGCAACTTTGCTGAAGATGAAGAAGATCTCATCATCAAGCTTCATGCCCTGCTTGGCAACCGTTGGTCTCTAATAGCAGGAAGATTACCCGGAAGAACAGACAACGAAGTAAAGAATTATTGGAACTCTCATCTAAGAAGAAAGCTCATCAACATGGGAATCGATCCAAATAATCACAGACAGAGTCACAAATTCCCTTCTTCTCTTCATCAAAATCAAACAACAACATCTGGTAGCTCAGCATCATCAGGCTCGAAACAACACAAAGATGCCAAGAACAACAACAACAACAACATTATTGAGCCAACAACAACAAATAACCCTAAAACTGGTGACAATAGTAAGCATGAACAAGTAGTTTCAGATGCTGCAAGTGGCTTGGAAGATGAATCCTCTGCCTTATTACCAGATCTAAACCTTGATCTCACTATTAACATTGCTTCAAGTGCTGCTTATGATGAACACAATCATCATGAAAAGCCTAATTCTTCATCATGA 696 0.4109 MRKPCCDKQDMNKGAWSKQEDQKLIDYIKKHGEGCWRTLPQAAGLLRCGKSCRLRWINYLRPDLKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHLRRKLINMGIDPNNHRQSHKFPSSLHQNQTTTSGSSASSGSKQHKDAKNNNNNNIIEPTTTNNPKTGDNSKHEQVVSDAASGLEDESSALLPDLNLDLTINIASSAAYDEHNHHEKPNSSS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1215 231 CDD SANT 15 60 IPR001005 -
Lele49g1215 231 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Lele49g1215 231 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Lele49g1215 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Lele49g1215 231 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 184 - -
Lele49g1215 231 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Lele49g1215 231 CDD SANT 68 111 IPR001005 -
Lele49g1215 231 Gene3D - 13 65 - -
Lele49g1215 231 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Lele49g1215 231 SMART sant 12 62 IPR001005 -
Lele49g1215 231 SMART sant 65 113 IPR001005 -
Lele49g1215 231 FunFam MYB transcription factor 67 128 - -
Lele49g1215 231 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Lele49g1215 231 Gene3D - 68 143 - -
Lele49g1215 231 FunFam MYB-related transcription factor 12 65 - -
Lele49g1215 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Lele49g1215 231 MobiDBLite consensus disorder prediction 121 186 - -
Lele49g1215 231 MobiDBLite consensus disorder prediction 120 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1215 Lele-ChrLele49 8130620 8132447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1215 2 212 MYB Transcription Factor Family AT4G38620 55.505 4.73e-79 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele49g1215 Myb_DNA-binding 1e-14 CL0123