Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1214 ATGTGGGGTGACATGGCAACCATTGAGGCTCTGATCTTGAAGCTCTCAAGACATTCCATTGAGGACCATAGAGCAGCTGTCACCGAAATCCGATCACTTTCAAAACGGAGCACAGACAACAGAATACTAATTGCTGAAGCTGGAGCGATTCCAGTTCTGGTCAACCTCTTATCATTTCCTGATGAGAACAAGATAATAATTGATTCCTCAGGAGCTCTCCCTCCTTTGATAGAATTGCTCCAAAATGGCAGCCCTAGAGGGAAGAAGGATGCAGCATCAGCATTATTCTACTCATGCATTAATGAAGGGAACAAGGGTAGGGCCATTAGATCAGGGATCATCCCTGCATTGTTGAAGATTCTTACAGATTCAAGAAAATCAATGGTTGATGAAGCCCTAACAATAATGTCAGTTCTTGGCAGCCATCACGGGGCAAGGGTTGCTATTGTAAACGCCAGCACTATGCCTGTTTTGATTGATCTTTTGATTACAGGTTTGCCTAGACACAAAGAGAATGCAGCCGCCATTTTGTTTTCGTTGTGTAAGAAAGATGCTAATAATCTTGCTTGTTTATGTACTCTTGGTGGTGTCAAGCCATTGACTGAACTTTCTCTCAGTGGCACTGAGAGGGCTAAATGGAAGGCCACTTCATCATGA 657 0.4353 MWGDMATIEALILKLSRHSIEDHRAAVTEIRSLSKRSTDNRILIAEAGAIPVLVNLLSFPDENKIIIDSSGALPPLIELLQNGSPRGKKDAASALFYSCINEGNKGRAIRSGIIPALLKILTDSRKSMVDEALTIMSVLGSHHGARVAIVNASTMPVLIDLLITGLPRHKENAAAILFSLCKKDANNLACLCTLGGVKPLTELSLSGTERAKWKATSS 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1214 218 Gene3D - 141 218 IPR011989 -
Lele49g1214 218 SUPERFAMILY ARM repeat 7 216 IPR016024 -
Lele49g1214 218 PANTHER U BOX DOMAIN-CONTAINING 8 58 - -
Lele49g1214 218 SMART arm_5 142 182 IPR000225 GO:0005515
Lele49g1214 218 SMART arm_5 101 141 IPR000225 GO:0005515
Lele49g1214 218 SMART arm_5 60 100 IPR000225 GO:0005515
Lele49g1214 218 Pfam Armadillo/beta-catenin-like repeat 61 95 IPR000225 GO:0005515
Lele49g1214 218 Gene3D - 4 59 IPR011989 -
Lele49g1214 218 Gene3D - 60 127 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1214 Lele-ChrLele49 8119159 8119992 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1214 3 217 U-box Gene Family AT1G23030 49.455 3.03e-72 228