Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1210 ATGGAGACTGGTAAGGGAGGGTCGTCGTCGTCGTCGTCGTCGTCTTACTATACCATTCTTGGTGTTAGTTCAGATTCAACCTCTACAGAAATAAGGAGAGCCTATCGCAAGCTTGCTTTGCAATGGCATCCAGATAGGTGGACTAGAACGCCTTCTTTGTTGAGTGAAGCTAAGCAGAAATTTCAGCAAATTCAAGAAGCTTATTCAGTTCTATCAGACCACAAGAAAAGAACAGTGTACGATGCAGGGTTGTATGATCCTGAAGATGAAGATGAGGGATTTTCTGAGTTTATGGAAGAGATGGTGTCTCTGATGACTCAAGTGAGGAAGGAGGAAAAGTATTATTACAGCATGGAGGAGTTACAGAGCATGTTTACTGAGATGGCTCATGATTTTGATCAGTCATCTTCATGGCGTTGCGGGTCCTCCATTGTTGATGATGATGATTCCCCTCACTTCTCAAAGAAGATCCGTTCGGACGAACATGGTAGAACCTCAGATTAA 504 0.4345 METGKGGSSSSSSSSYYTILGVSSDSTSTEIRRAYRKLALQWHPDRWTRTPSLLSEAKQKFQQIQEAYSVLSDHKKRTVYDAGLYDPEDEDEGFSEFMEEMVSLMTQVRKEEKYYYSMEELQSMFTEMAHDFDQSSSWRCGSSIVDDDDSPHFSKKIRSDEHGRTSD 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1210 167 PRINTS DnaJ domain signature 17 35 IPR001623 -
Lele49g1210 167 PRINTS DnaJ domain signature 56 76 IPR001623 -
Lele49g1210 167 PRINTS DnaJ domain signature 155 167 IPR001623 -
Lele49g1210 167 PRINTS DnaJ domain signature 35 50 IPR001623 -
Lele49g1210 167 PANTHER PUTATIVE, EXPRESSED-RELATED 9 143 - -
Lele49g1210 167 MobiDBLite consensus disorder prediction 145 167 - -
Lele49g1210 167 SUPERFAMILY Chaperone J-domain 12 90 IPR036869 -
Lele49g1210 167 Pfam DnaJ domain 16 81 IPR001623 -
Lele49g1210 167 ProSiteProfiles dnaJ domain profile. 15 84 IPR001623 -
Lele49g1210 167 CDD DnaJ 16 73 IPR001623 -
Lele49g1210 167 Gene3D DnaJ domain 5 128 IPR036869 -
Lele49g1210 167 MobiDBLite consensus disorder prediction 136 167 - -
Lele49g1210 167 ProSitePatterns Nt-dnaJ domain signature. 61 80 IPR018253 -
Lele49g1210 167 SMART dnaj_3 14 76 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1210 Lele-ChrLele49 8062458 8063580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1210 8 82 C2H2 Transcription Factor Family AT1G74250 46.053 6.73e-15 69.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g1210 49 8062458 8063580 Lele49g1210 49 8062458 8063580 ECH
Lele49g1210 49 8062458 8063580 Lele51g1230 51 8114606 8115721 hybridization
Lele49g1210 49 8062458 8063580 Lele52g1587 52 19782112 19783225 hybridization