Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1201 ATGCATCCTATTCTACACTTCTCAAAAATGGAGTCAACTGCAAGATCCAACTCTTTCACAGTCATCTTCTTCTTCTTACTCCTCCTCAACGTCTCTGCTTCTTCAAATCCAACCCCTTCCTTCCCAAAACAGGCCTTGCCCACAAAATCTGGATACCTCCCTGTTAATCGCACCTCCAAATCCGCCATTTTCTACGCTTTCTATGAAGCTCAGAACCTCACTTCACCTATCTCCCGAACCCCACTTCTCATCTGGCTCCAAGGCGGCCCTGGTTGTTCCTCCATGATCGGCAACTTCTACGAGCTCGGTCCATGGCGCCTCACCAAATCCCTTAATCTCGTTCCCAACCCTGGCTCTTGGAACAGAATCTTCGGCGTCCTTTTCCTCGATAACCCAATCGGAACAGGATTCAGTATCGCCTCAAATCCTGAGGAAATCCCCAGAAACCAGAAATCTGTAGCCAAACACCTCTTCGCTGCTATAACCAAGTTCATTCAACTCGACCCTGCTTTCAAGTATCGCCCGATTTATATAACCGGCGAAAGTTATGCCGGGAAATACGTTCCCGCGATTGGGTATTACATATTACAAAGGAATTCACGTTTGAATGCATCCCAAAGTATGAATTTGGCAGGTGTAGCAATTGGAGATGGGTTAACACACCCTATAGTACAAGTTGCTACTCATGCTTTGAATGCTTATTATATTGGTTTGATCAATGAGAGGCAAAAGATTGAGTTAGAGAAAGCTCAATTGGAAGCAATCAGATTGACCAAATTGGGGAATTGGAGTGCAGCAGTAGATGCTAGAAGTGATGCTCTGAGAATGTTGCAGAACATGACTGGTTTAGCTACTTTGTATGACTACACAAGAAAAGCTCCATATGAAGATTATTTGGTCGATGAGTTCTTGAAATCCAGCGATGTGAAGAAGGCATTAGGGGTGAATGAGTCTCATGTTTTTGAAGGATGTAGTGATGCTGTAGGAATTGCAATGAAAGAGGATATTATGAAGAGTGTGAAGTACATGGTGGAATACCTGGTGACAAAAACCAGAGTGCTTTTGTATCAAGGCCAGTATGATCTGAAAGATGGTGTGGTTCAAGTAGAAGCATGGGTGAAGAGAATGAAATGGGAAGGGATTGAGAAGTATTTGAATGCAGATAGGAAGATATGGAAAGTGAATGGTGAGAATGCTGGGTATGTTCAAAAATGGCAGAGCCTTACTAATGTTGTTGTTTTAGGATCTGGCCATCTTTTGCCTGCTGATCAATCTGTGATTTCTCAAGCCATGATTGAGAACTGGGTTTTGCAGAAGGATTTGTTTGAGAAGGATGATCAACAGGAGAATGTGCCACTAAGTTTGTGA 1368 0.4327 MHPILHFSKMESTARSNSFTVIFFFLLLLNVSASSNPTPSFPKQALPTKSGYLPVNRTSKSAIFYAFYEAQNLTSPISRTPLLIWLQGGPGCSSMIGNFYELGPWRLTKSLNLVPNPGSWNRIFGVLFLDNPIGTGFSIASNPEEIPRNQKSVAKHLFAAITKFIQLDPAFKYRPIYITGESYAGKYVPAIGYYILQRNSRLNASQSMNLAGVAIGDGLTHPIVQVATHALNAYYIGLINERQKIELEKAQLEAIRLTKLGNWSAAVDARSDALRMLQNMTGLATLYDYTRKAPYEDYLVDEFLKSSDVKKALGVNESHVFEGCSDAVGIAMKEDIMKSVKYMVEYLVTKTRVLLYQGQYDLKDGVVQVEAWVKRMKWEGIEKYLNADRKIWKVNGENAGYVQKWQSLTNVVVLGSGHLLPADQSVISQAMIENWVLQKDLFEKDDQQENVPLSL 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1201 455 FunFam Carboxypeptidase 32 443 - -
Lele49g1201 455 Pfam Serine carboxypeptidase 45 437 IPR001563 GO:0004185|GO:0006508
Lele49g1201 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Lele49g1201 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 408 421 IPR001563 GO:0004185|GO:0006508
Lele49g1201 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Lele49g1201 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Lele49g1201 455 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 49 424 IPR001563 GO:0004185|GO:0006508
Lele49g1201 455 SUPERFAMILY alpha/beta-Hydrolases 47 439 IPR029058 -
Lele49g1201 455 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Lele49g1201 455 Gene3D alpha/beta hydrolase 31 452 IPR029058 -
Lele49g1201 455 Coils Coil 240 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1201 Lele-ChrLele49 7983396 7984763 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1201 309 432 Calmodulin-binding Proteins AT2G22960 24.219 8.40e-08 50.4