Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1200 ATGGGGTCCACAAGAATTAATGCTCTTGTGATCTTCCTTCTCTCCACTCTCGTCTTCTGCTTGAATCACATCCATGTTTCTTCTTCTTCTTCGTCCCTAAATCCATCCCCTGTTCTACCAAAACAAGCCCTACCTACAAAATCTGGCTACCTCCCTGTCATCCATACCTCCAATTCTGCCATTTTCTACACTTTCTATGAAGCTCAGTACCTTACTCCACCTCTCTCCCAAACCCCACTTCTCATGTGGCTCCAAGGCGGCCCTGGCTGCTCCTCCATGATCGGCAACTTCTTCGAGCTCGGTCCATGGCGCGTCACCAAATCCCTAACTCTCGAACCCAATCCTGGTTCTTGGAACAGAATCTTCGGCATCCTTTTCCTCGATAACCCAATCGGAACCGGATTCGGCATCGCCTCAAAACCTGAGGAAATCCCCAGAGATCAGAAATCTGTAGCCAAACACCTCTACGCTGCTATAATCAAGTTCATTCAACTTGACCCTGCTTTCAAGTATTGCCCAATTTATATAACCAGTGAAAGCTACGCTGGGAAGTATGTTCCTGCAATTGGGTATCACATATTACAGAGGAGTTCTCGATTGAATGTTTCACAAAGAGTGAATTTGGCAGGTGTGGCAATTGGCGATGGGCCGATTGATCCAGTGCCACAAGTTGCAACTCATGCTAAGAATGCTTACTATATTGGTCTGATCAATGAGAGGCAGAACAATGAGGTGGAGAAGGCTCTATCAGAGGCAATCAGATTGACCAAATTGGGGAATTGGAGTACAGCAACAAATGCCAGATTCAACGCTTTGAATCTGTTGCAGAACATGACTGGTTTAGCTACTTTGTATGATTACACCAAGAAAGCTCCTTATGAGAGTAATTTGGTGACTGAGTTCTTGAAATCCAGTGAGGTGAAGAAGGCACTTGGGGTGAATGAATCTGTTGTGTTTGAAGGTTGCAGTGATGCTGTTATGGCTATATTATATGAGGACTTAGTGAAAAGTGTGAAGTATATGGTGGAGTACTTGATGAAGAGGACTAGGGTTCTTCTATACCAAGGGCTATATGATTTGAAGTTAGGGGTGGTTCCAAGTGAGGCATGGGTGAAGACAATGAAATGGGAAGGAATTGAGAAGTATTTGAATGCAGAGAGAAAGATTTGGAAAGTGAATTGTGAAGTTGAAGGATATGTGCAAAAATGGGGAAGATTCACAAATGTTGTGGTTTTGGGGGGTGGCCATCTTTTGCCTGCTGATCAACCTCTCAATTCTCGAGAGATGATAGAAGACTGGGTTTTAGAGAGGAATATGTTTGAATATGAGCAACAAGGGATAGTTTCTACGATTTAG 1356 0.4388 MGSTRINALVIFLLSTLVFCLNHIHVSSSSSSLNPSPVLPKQALPTKSGYLPVIHTSNSAIFYTFYEAQYLTPPLSQTPLLMWLQGGPGCSSMIGNFFELGPWRVTKSLTLEPNPGSWNRIFGILFLDNPIGTGFGIASKPEEIPRDQKSVAKHLYAAIIKFIQLDPAFKYCPIYITSESYAGKYVPAIGYHILQRSSRLNVSQRVNLAGVAIGDGPIDPVPQVATHAKNAYYIGLINERQNNEVEKALSEAIRLTKLGNWSTATNARFNALNLLQNMTGLATLYDYTKKAPYESNLVTEFLKSSEVKKALGVNESVVFEGCSDAVMAILYEDLVKSVKYMVEYLMKRTRVLLYQGLYDLKLGVVPSEAWVKTMKWEGIEKYLNAERKIWKVNCEVEGYVQKWGRFTNVVVLGGGHLLPADQPLNSREMIEDWVLERNMFEYEQQGIVSTI 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1200 451 Pfam Serine carboxypeptidase 44 434 IPR001563 GO:0004185|GO:0006508
Lele49g1200 451 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Lele49g1200 451 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 47 423 IPR001563 GO:0004185|GO:0006508
Lele49g1200 451 Gene3D alpha/beta hydrolase 25 450 IPR029058 -
Lele49g1200 451 Coils Coil 238 258 - -
Lele49g1200 451 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Lele49g1200 451 PRINTS Carboxypeptidase C serine protease (S10) family signature 406 419 IPR001563 GO:0004185|GO:0006508
Lele49g1200 451 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Lele49g1200 451 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Lele49g1200 451 SUPERFAMILY alpha/beta-Hydrolases 45 434 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1200 Lele-ChrLele49 7979317 7980672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1200 332 434 Calmodulin-binding Proteins AT2G22960 24.038 1.14e-07 50.1