Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1193 ATGTCTGGTCCATTCAGTGCCTTCAAGCTTCACTCTAATTACACTCCAAATCCCACCATTAATATTTCTCCATCATCATCAGCTCCAGAAATCACTCCAAATCTTCATTGTATTTGTGCCCACTGCACCAATTTTTTCTCCTTCAATATTCACCATCGTCTGGGAGAGGAAGAAGAAGGTATTTCTATTACGAGCAGCTCAAGGTGGAATCCAACACCTGCACAACTTTTATACCTCGAGCAACTTTATAGACAGGGAACGAAGACCCCAACTGCTCAACAAATACAGTTAATTGCTTCGCAGCTACGCCGTTTTGGCAATATACAAGCCAAGAATGTCTTCTACTGGTTCCAGAACCACAAAGCAAGAGACCGCCAGAAACGTCGCCGTTCCGACATGGAAATCTCTCCTCCTTCACCTCCTGCTCTGCAACACGCTCGTCAAGGATTGAGAGGGACAGGTTATGAAGTTAAAGAGACAAACAAGTGGGCATCTTCTTCAAACTGCAGTGCACTTGCAGAGGTTTCTGATTCACTGAATAGAGCAGAAAGAGGAGCTTATAGGAGGACTCAAAGGGAGGAGAGAGAAACACAAATTTTGAGAGTCAAGAGAGAGGAAAGCCTACAAGCTAAGTGCCAAATTAGAGATCATATGTCTTCTTTCTTCCTTTCAAACTCCAACAAGAATCTCAACATCAAAAGCATTAAAACTTCAAACCCTACAAATTATTACTGTTATGATGATGAAGAAGAAGAAGTTGCAGATGAAAGAACCCTTAAGCTGTTTCCTCTTAAGAGATCAGATGAAGATGATGAAAGCATCAAAGATAAAGATAAATTCTGTTCCTTCAATAATGCTTTCATGGACTCTGATGAAATCACTTCCAATAAGTTTTTTGAGTTCCTTCCTTTAAGAAAATGA 921 0.4061 MSGPFSAFKLHSNYTPNPTINISPSSSAPEITPNLHCICAHCTNFFSFNIHHRLGEEEEGISITSSSRWNPTPAQLLYLEQLYRQGTKTPTAQQIQLIASQLRRFGNIQAKNVFYWFQNHKARDRQKRRRSDMEISPPSPPALQHARQGLRGTGYEVKETNKWASSSNCSALAEVSDSLNRAERGAYRRTQREERETQILRVKREESLQAKCQIRDHMSSFFLSNSNKNLNIKSIKTSNPTNYYCYDDEEEEVADERTLKLFPLKRSDEDDESIKDKDKFCSFNNAFMDSDEITSNKFFEFLPLRK 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1193 306 CDD homeodomain 68 128 IPR001356 GO:0003677
Lele49g1193 306 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 57 301 IPR044555 GO:0003700|GO:0099402
Lele49g1193 306 SUPERFAMILY Homeodomain-like 66 130 IPR009057 -
Lele49g1193 306 SMART HOX_1 64 131 IPR001356 GO:0003677
Lele49g1193 306 MobiDBLite consensus disorder prediction 124 149 - -
Lele49g1193 306 Pfam Homeodomain 66 126 IPR001356 GO:0003677
Lele49g1193 306 Gene3D - 66 133 - -
Lele49g1193 306 ProSiteProfiles 'Homeobox' domain profile. 62 127 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1193 Lele-ChrLele49 7921776 7923660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1193 54 174 Wox Gene Family AT3G18010 49.206 3.88e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele49g1193 Homeodomain 2.1e-17 CL0123