Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1183 ATGATAACCCAACGCCTTCATCTCCTCTTCCTCCACCTCCTCGCCGCCGCCTCATTCCACTGTCTCCGTCAATCATCCGCTTACACCCTCGTAGTCGACCCCACCAACGACTTCAACCCCAGCGCCACCACATTCATCCGCACAAGTTGTAACGCTACCCTCTACCCCGGGATCTGCTACTCCTCCCTCTCTCCCTACTACAATGCCATCCAACAGAACTCCGGCAAGCTTGCTCGTGTCGCCATAGCTTTGACCCTCACTAAGGCCCACCGCATGGCCTCCTACCTCTCCGGCCTCTCTCGTGACGCCGACTACAGCACCAACTCACGAGCCACCTCCGCTCTCCGCGACTGCTTCACCAACCTCGGAGACGCAGTCGACGAAATCCGCGGGTCGCTCAAGCAGATGCGCCAGTTAGCAATGAACGGTGCCGGCGGCGAGCAGTTCAGGTTCCAGATGAGCAATGTGCAGACGTGGATGAGCGCGGCGCTGACCGATGAGGACACGTGTACGGACGGGTTCGAGGATGTACAGGAAGGTTCCGTGAAGGCGGATGTATGTGATCGGATGACGTACTTGAAGGAGCTCACCAGCAACGCCTTGGCGCTGGTGAATAGTTACGCTAACAAGGAAATGCGTTATTAG 645 0.5767 MITQRLHLLFLHLLAAASFHCLRQSSAYTLVVDPTNDFNPSATTFIRTSCNATLYPGICYSSLSPYYNAIQQNSGKLARVAIALTLTKAHRMASYLSGLSRDADYSTNSRATSALRDCFTNLGDAVDEIRGSLKQMRQLAMNGAGGEQFRFQMSNVQTWMSAALTDEDTCTDGFEDVQEGSVKADVCDRMTYLKELTSNALALVNSYANKEMRY 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1183 214 Pfam Plant invertase/pectin methylesterase inhibitor 45 203 IPR006501 GO:0004857
Lele49g1183 214 FunFam Pectin methylesterase inhibitor 1 41 207 - -
Lele49g1183 214 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 207 IPR035513 -
Lele49g1183 214 SMART PMEI_2 41 203 IPR006501 GO:0004857
Lele49g1183 214 TIGRFAM PME_inhib: pectinesterase inhibitor domain 31 207 IPR006501 GO:0004857
Lele49g1183 214 CDD PMEI-like_3 48 209 - -
Lele49g1183 214 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 207 IPR035513 -
Lele49g1183 214 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1183 Lele-ChrLele49 7833456 7834100 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1183 13 203 Carbohydrate Esterase AT3G49220 31.250 1.52e-14 70.1