Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1182 ATGCCTCTTGTTTGCAACAACACCGGCTACGCTGACCTCTGCTACTCCTCCGTCTCTCCCTACGCCAAAGTCATCAAGCAAAACGGCGCTGCACTGGCTCGCGTCGGTGTTGCTGTATCTCACTCAGTGGTTCGCGGTGTAACCACCGATGTCTCCGGTCTCTCCGGCAAAGCCAAGGGCAGAGCCGCGGACGCGATCAGTGACTGCGTTTCCACCCTTGGGGACGCCTTAGATCAAATAGGTGACTCACTTGGTCAGCTCCGACAGATAGTGGCCGGCAAAGGCGGCGATTTCAAGTTTGCCATGGACACTGTGCTGACCGAGATGAGCGCGGCGCTGACGAACGAGGACACGTGTACGGATGAGTTCGAGGATGAACCAGAAGGTCCGGTGAAGAAGAAGGTAGTGGATCTTGTGACGGATGCGAGAAGTTCACAAGCATCGCGCCCTCAGCTCCTCTCCCTCCTCCTCGTCGCACCCACATTCCACCTTCTCCCTCCGTCATTAGCCGCTGCTTCCTCCACGTCCAAAGCCCCCGCCCCCGCTCCCGGCGCTGCCGATTTCATCCGGTCAGTTTGCAACAAAACTGGCTACCCTGACCTCTGCTACTCCTCCATCTCTCCCTACGCCAATGTCATCAAGCAAAGCCTCGCGGCATTGTCTCTTGCCGGCGTCGCTGTGGCTCACTCAGTGGTCCGAAGTGTAGCCACTGATATCTCCGGTCTCTCGGATGAAGCCAAGGGTGGAACCACGGGAGCGATCAGTGACTGCATTTCCACCCTTGGGGATGCCGCAGATCAAATAAATGACTCACTAGGTCAACTCCGACAAGTAGCTGCCGGCAAAGGCGGCGATTTCAAGTTCGCAATGGACTCGGTGCTTACGGCGATGAGCGCAGCGATGACAAACGAGGATACATGCATGGATGAGGTCGAGGATGAACCGGAAGGTCCGGTGAAAAAGAAGGTGGTGGATCGCGTGATGGAGGCAAACAAGTTCACAAGCATAGCCTTGACGTTTGTGAATTATTACGCTAAGAATGGTTCACACTAA 1053 0.5594 MPLVCNNTGYADLCYSSVSPYAKVIKQNGAALARVGVAVSHSVVRGVTTDVSGLSGKAKGRAADAISDCVSTLGDALDQIGDSLGQLRQIVAGKGGDFKFAMDTVLTEMSAALTNEDTCTDEFEDEPEGPVKKKVVDLVTDARSSQASRPQLLSLLLVAPTFHLLPPSLAAASSTSKAPAPAPGAADFIRSVCNKTGYPDLCYSSISPYANVIKQSLAALSLAGVAVAHSVVRSVATDISGLSDEAKGGTTGAISDCISTLGDAADQINDSLGQLRQVAAGKGGDFKFAMDSVLTAMSAAMTNEDTCMDEVEDEPEGPVKKKVVDRVMEANKFTSIALTFVNYYAKNGSH 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1182 350 Gene3D Invertase/pectin methylesterase inhibitor family protein 3 144 IPR035513 -
Lele49g1182 350 Pfam Plant invertase/pectin methylesterase inhibitor 4 137 IPR006501 GO:0004857
Lele49g1182 350 Pfam Plant invertase/pectin methylesterase inhibitor 187 338 IPR006501 GO:0004857
Lele49g1182 350 PANTHER PECTINESTERASE INHIBITOR-LIKE 4 135 - -
Lele49g1182 350 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 136 IPR006501 GO:0004857
Lele49g1182 350 TIGRFAM PME_inhib: pectinesterase inhibitor domain 171 344 IPR006501 GO:0004857
Lele49g1182 350 CDD PMEI-like_3 3 143 - -
Lele49g1182 350 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 4 139 IPR035513 -
Lele49g1182 350 Gene3D Invertase/pectin methylesterase inhibitor family protein 185 344 IPR035513 -
Lele49g1182 350 SMART PMEI_2 1 145 IPR006501 GO:0004857
Lele49g1182 350 SMART PMEI_2 184 340 IPR006501 GO:0004857
Lele49g1182 350 CDD PMEI-like_3 191 346 - -
Lele49g1182 350 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 187 344 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1182 Lele-ChrLele49 7824972 7831501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1182 170 341 Carbohydrate Esterase AT3G14310 25.532 1.75e-09 57.4