Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1181 ATGACAACCCAATCCCCTCATTTCCTCTCTTCTCTCTTACTCCTCACTGTCACAATATTCAATCTCCACACAACCGCCGTCGCAGTCCGCTCCACCACCACCACAACCGCCTCTGTCAATTCCGATGCCGCCGCTTTTATCCGTACATGCTGTCGCATATGCCTCTACCCTGACCTCTGCGTCTCCTCTCTCTCTTCCTTTACGAATAATATCCAAAATAACCATGCCATGCTCGCTCGCGCCGCCATAACTGTTAGCCTCACCAGAGCCCAGAGCATGGCCTCCTACGTCTCCAACCTCCTCCGTGAAGCCAACGCGGACCCCAGCACCTCCTCTGCCCTCCGTGACTGCTCTTACGGGCTCGGGGTCGCCGTTGATAACATCCGCGGCTCACTCAAGCAGATGCAACAGATGATTGATAACAGCGCCGTTGATGGAGAGAAATTCAGGTTCCAGATGAGCAGCGTTCAGACGTGGATGAGCACGGCGATGACGGAGGAGCAGGCGTGCAGCCAGCGGTTCGATGCTGTGTCGGATGGTAAGGTGAAGGCCGATGTGGTTCGTCAAGTGACGGCGGTGAAGAAGTTTATCAGTAATGCGCTTGCACTGGTGCATAGTTACGGGAAGAACGTGAGAAAACCCTAA 645 0.5457 MTTQSPHFLSSLLLLTVTIFNLHTTAVAVRSTTTTTASVNSDAAAFIRTCCRICLYPDLCVSSLSSFTNNIQNNHAMLARAAITVSLTRAQSMASYVSNLLREANADPSTSSALRDCSYGLGVAVDNIRGSLKQMQQMIDNSAVDGEKFRFQMSSVQTWMSTAMTEEQACSQRFDAVSDGKVKADVVRQVTAVKKFISNALALVHSYGKNVRKP 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1181 214 SMART PMEI_2 42 203 IPR006501 GO:0004857
Lele49g1181 214 CDD PMEI-like_3 49 209 - -
Lele49g1181 214 TIGRFAM PME_inhib: pectinesterase inhibitor domain 31 206 IPR006501 GO:0004857
Lele49g1181 214 Pfam Plant invertase/pectin methylesterase inhibitor 46 203 IPR006501 GO:0004857
Lele49g1181 214 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 207 IPR035513 -
Lele49g1181 214 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 203 - -
Lele49g1181 214 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 206 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1181 Lele-ChrLele49 7821108 7821752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1181 8 203 Carbohydrate Esterase AT5G53370 27.778 1.84e-13 67.0