Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1158 ATGAAGGCAATGCAGTTACCTTTATTCGACTTGTGGAACAGATCTTCAGCGGTGTATTCCTTAAAGTTAACAAAAGCCACAGTGAACATGCTGCACAGAGTTGAACCTTATGTAACTTATGGATACCCAAATCTGAAGAGTGTTAGAGAACTTATTTACAAGAGAGGTTATGGTAAGGTCAACAAGCAGAGAATTACTTTAACTGACAACTCCATTGTTGAGCAGGAACTGGGCAAACGTGGAATCATTTGCACTGAGGATCTTATCCATGAGATCATGACAGTTGGTCCCCACTTTAAGGAAGCCAACAACTTCCTTTGGTCATTTAAGCTCAAGGCTCCTTTAGGCGGACTCAAGAAGAAGAGGAACCACTATGTTGAAGGAGGAGATGCCGGAAACAGAGAAAATTACATAAATGAGCTCATCAGAAGAATGAACTAA 441 0.4082 MKAMQLPLFDLWNRSSAVYSLKLTKATVNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKVNKQRITLTDNSIVEQELGKRGIICTEDLIHEIMTVGPHFKEANNFLWSFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1158 146 CDD Ribosomal_L7_archeal_euk 6 146 IPR035808 -
Lele49g1158 146 Gene3D - 92 146 IPR036919 -
Lele49g1158 146 Gene3D - 5 91 IPR036919 -
Lele49g1158 146 PANTHER 60S RIBOSOMAL PROTEIN L7 16 146 IPR039699 -
Lele49g1158 146 FunFam 60S ribosomal protein L7 94 146 - -
Lele49g1158 146 FunFam 60S ribosomal protein L7 4 93 - -
Lele49g1158 146 SUPERFAMILY Ribosomal protein L30p/L7e 18 146 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1158 Lele-ChrLele49 7669567 7670163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1158 21 146 Cytoplasmic Ribosomal Protein Gene Family AT2G44120 88.095 1.61e-81 238