Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1157 ATGCAGCAATCTGCAGCAGATCATCAACGTCTACATCATCTTCCTCCTCCTCCTCCAGATTTCTTTTCTCAGTATTTCCCTAGGGGCTTGAAGGTCCTCTTAGTTGGCACCGATAATGTCACCCAAAATAGTATTCAAAGACATCTTCCACCTCCTCGTTATCACATAACTTACTGTCACTCTGGTACTTCTGCCTTACAACACTTACAAAACAAAGATGTTTCCTTTGACTTGATTCTTAGTGATGTCTTCTTGGAAGACATGGATGGCTACGAATTCATCAGACACCAACGAGCGAAAACAAATATTCCTCACGTTGCGATAAGTGGGCTAGAAAGAGCAAGTAGCATAAGGACAGCATACAAAAGTGGCGTGTGTTATGTTTTGTGGAAGCCAGTGAATGATAGTGAGCTGAGGAATTTATGGCAACATGTTTGTAAGAGGAGGGAACAAGATGATCATCAGCCTGAGATTGATGACTTCTTCAACGGTGACGCTGATGACAATAATCATAATTATCAGCAGCATCGATTATTAATACGACAGCAGCATCCTCATCAGGATGGGGGCTGCTCTTCTTCTCTTGTCGTTTCCAGAGACAACAGTCCGAAGGTAGAAAACGGCAGTGAGTTTGTGAATAATAGTAATCATGGAGATCAAAGTGCTTTGAAAAAACCACGGATAAACTGGACACAAGAACTCCATCAGAATTTTCTTAATGCCGTCACAATTCTTGGCGGCGTGGAAAAGGCGGTGCCAAAAGCGGTTCTTGATAAAATGGTGGATGTGCCTTCTCTGACGAGGGAAAATGTGGCCAGTCACTTACAGAAATACAGAATGTACTTAAAGAGAATGGAGGAAGATCGGCTGAGGGAAAATCATAATCATATGAATGCGATGCCTGTGAACCAAATGCCTCTATGTAATGACCCTGGCTATGGAAGATTTATTGCCAATAATATAATTTCTGCTCAACCAGTAACAACAGTTCGTTTTCAACCTGATGACTTGTGGGTTTTTCAAAACGCTAGTAATAATAATCATCATCAACCCCACCTTCTAGAACCTTCCAGGAATAATTCTCCTCCTCCTCGTCATCATCTCACAGATGAAGGAATTTCCCTCTGGTCCCTAGCCCATCAAGTTCATCCTCATGTGGTTCCAATAGTAACGGTACCTCCTGCAGGAAATGTAAGCAATATGCAGCAGCAACAGATAGCTCAAAACTTGATCACTTCTGGTATGCAGCAACTAGATCAAAACCTAACTTCAGGTTCTTGCCATGGAAACAATATGAAGCAGACTGATCAAAACCTAGCTTCTAGTTCTTGCCATGGAAACAATATGAACCAGCTTGATCAAAACCTAGCCTCTGGTTCTTGCCATGGAGGCAATATGGAGTATATTGATCAAAACCTAGCTTCAGGTACTTCCTATGGAAGCAATGAGCAGATGAATCAAAACCTGACTTTTGCTATGCAGCATCAAGGGTCAAGTCAAAACCTAGCTTCAAGTTCTTGCCATGGAAACAATATGAACCAGCTTGATCAAAACCTAGCTTCTGGTTCTTTCCATGGAGGCAATATGGAGCATTTTGATCAAAATCTAACTTCAGGTACTTCCTATGGAAGCAATGCGCAGATGAATCAAAACCTGACTTTTGCTATGCAGCATCAAGGGTCAAGTCAAAACCTAGCTTCAAGTTCTTGCCATGGAAACAATATGAACCAGCTCGATCAAAACCTAGCTTCAGGTACTTCCTATGGAAGCAATGTGCAGATGACTCAAAACCAGACTTTTGCTATGCTGCATCAAGGGTCAAGTCAAAACCTAGCTTCAAGTTCTTGCCATGGAATCAATATGAACCAGCTCGATCAAAACCTAGCTTCAGGTACTTCCTATGGAAGCAATGTGCAGATGACTCAAAACCAGACTTTTGCTATGCTGCATCAAGGGTCAAGTCAAAACCTAGCTTCAAGTTCTTGCCATGGAAACAATATGAACCAGCTTGATCAAAACCTAGCTTCAGGTTCTTGCCATGGAGGCAATTTGCATATAACTCAAAACCCGACTTCTGGTATGCAGAATCTAGATGTAGCTTCAGGTTCTTTACATGAAGGCAATATGCAACATCATCAGGATCAAAACCTAGCTTCAGGTTCTTGTTATGTTACTTCTACTCGAGGTGGTAATGGTGATGGAATCGTAAAGACAGAAGCAACACCTGTAATTAGGGATCATGATGGTGAATTGTGTGATAATTTTGATGACTACTTTGACGAGACAAATCTTAACCTCATTATGGCTGATCCTGATCATACCCAATACATGATTTAA 2337 0.4155 MQQSAADHQRLHHLPPPPPDFFSQYFPRGLKVLLVGTDNVTQNSIQRHLPPPRYHITYCHSGTSALQHLQNKDVSFDLILSDVFLEDMDGYEFIRHQRAKTNIPHVAISGLERASSIRTAYKSGVCYVLWKPVNDSELRNLWQHVCKRREQDDHQPEIDDFFNGDADDNNHNYQQHRLLIRQQHPHQDGGCSSSLVVSRDNSPKVENGSEFVNNSNHGDQSALKKPRINWTQELHQNFLNAVTILGGVEKAVPKAVLDKMVDVPSLTRENVASHLQKYRMYLKRMEEDRLRENHNHMNAMPVNQMPLCNDPGYGRFIANNIISAQPVTTVRFQPDDLWVFQNASNNNHHQPHLLEPSRNNSPPPRHHLTDEGISLWSLAHQVHPHVVPIVTVPPAGNVSNMQQQQIAQNLITSGMQQLDQNLTSGSCHGNNMKQTDQNLASSSCHGNNMNQLDQNLASGSCHGGNMEYIDQNLASGTSYGSNEQMNQNLTFAMQHQGSSQNLASSSCHGNNMNQLDQNLASGSFHGGNMEHFDQNLTSGTSYGSNAQMNQNLTFAMQHQGSSQNLASSSCHGNNMNQLDQNLASGTSYGSNVQMTQNQTFAMLHQGSSQNLASSSCHGINMNQLDQNLASGTSYGSNVQMTQNQTFAMLHQGSSQNLASSSCHGNNMNQLDQNLASGSCHGGNLHITQNPTSGMQNLDVASGSLHEGNMQHHQDQNLASGSCYVTSTRGGNGDGIVKTEATPVIRDHDGELCDNFDDYFDETNLNLIMADPDHTQYMI 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1157 778 SUPERFAMILY CheY-like 28 157 IPR011006 -
Lele49g1157 778 SMART REC_2 30 142 IPR001789 GO:0000160
Lele49g1157 778 FunFam Two-component response regulator 221 286 - -
Lele49g1157 778 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 200 554 IPR044841 GO:0003700|GO:0006355
Lele49g1157 778 MobiDBLite consensus disorder prediction 184 222 - -
Lele49g1157 778 Gene3D - 30 161 - -
Lele49g1157 778 Gene3D - 222 286 - -
Lele49g1157 778 Pfam Myb-like DNA-binding domain 229 279 IPR001005 -
Lele49g1157 778 Pfam Response regulator receiver domain 32 140 IPR001789 GO:0000160
Lele49g1157 778 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 225 280 IPR006447 GO:0003677
Lele49g1157 778 ProSiteProfiles Response regulatory domain profile. 31 146 IPR001789 GO:0000160
Lele49g1157 778 SUPERFAMILY Homeodomain-like 223 284 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1157 Lele-ChrLele49 7662369 7665709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1157 26 292 Response Regulator Gene Family AT4G31920 34.082 8.53e-38 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele49g1157 Response_reg 5.1e-12 CL0304