Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1156 ATGAGGCAATCTGCATCCGATCAATGTTGCCATGATCCTCTTGCTTCTCAAGAATTCTTCTCTCAGTATTTCCCTGAGGGCTTTAAGGTCCTCTTTGTAGGCACTGATAATGTCGCCCAAACTCTTCGGAGACAACTTAAACCACCTTATTATCATATCACTCACTGTCACACTGGTGCTTTAGCCTTACAACAATTACTCGACAAAGATTCTTCCTTTGACTTGGTTCTCAGTGATGTCTCCTTGCAAGACATGGATGGCTACCAGTTCCTAAGAGACCAACACTTGAAGACAAATATTCCCCATGTTGTGATAGGTGGACGTGAAAGATGGAGTAGCATAAAGACAGCATTCAGATTGGGTGCTTGTTATGTTTTGGGGGAGCCAGTGAATGACAGTGAGGTGAGGAATCTATGGCAACATGTTTGTAGGAGGAGGGAACAACATGATCATCAGCCTGAGACTGATGATTTCTCCAATCGTGAAGTGGATGAGGGTTCTTCTTCTCTTGTCATTTCCAGAGACACAAGTCTGAAGGGAGAAAACGACATTGAGTCTATGAATAATAATCATGGATATCAACGTTCTTCCAAGAAACGAAGAGTCGTCTGGACCAAAACGCTCCACCAGACGTTTCTTGATGCCGTGGATTATATTGGTCTTCATATTCTTCATCCCCCTGATGTGAGTGTTCTTCAACATCCACCTCCACCTCCTCCTCAAAACCCTAATAATCTCGGCCACCTTCTAGAACCTTCTGGGAATAATTCTGATCCTCTAATTCCTCCGGATGAAGCTTTCCTCTGGTCCGTAGCCCATAACGATCCCCTTATTTACCAGCTTTCCCTCCACCAAATGCAACCGCAACCACCACTTGAACAAGACTTGAGCTTTGCTGGTGGTCATCAAGTGGTTCCGCTGGCAATGGTACCTCCATCTCTTCCACGACATGGAAGCAATATGCTGCAACAGTTTGATGAAAACCTCGCTTCTGGTTCTTCCCATGGAGGTAATATGCGGATAACTCAAACCTTGACTTCTGGTACTCAACATCTTGAGTCAAGTCAAAACTTAGCTTCAGGTTCTTGCTATGCAAACAATATGAAGCATCTTGATCAAAACCTAGCTTTAGGTTTTTGCCATGGAGACACTATTAAGCAGCTTGATGAAAACCTAGCTTCAGGTTCTTGCCATGGAGGCATTTTTCAGATAACGACTCAAAACCTGACTTATGACATGCAATACCTAGACCTAGGTTCAGGTTCTTCCCATGGAGGCAATATGCAGGAGCATCATCAAGATCAAAACCTAGCTTCAGGTTCTTGTTATGTTACTGCTACTACTGAAGGTGGTAATAATAATGATCTTGATGGAATCATCATGACAGAAGCAGAACTTGTAATTGGGGATAATGATGATGGATTTTGTGATAATTTTGGTAATCACTTTGACGAGGCAAATCCTGATGAATTAATTATGGCTCAATTCTACATGAACCCTGTAGAAAATAAAGGGACTGGATCCTCCACGTCTACACCTGCTGACCAAAAGTGA 1554 0.4299 MRQSASDQCCHDPLASQEFFSQYFPEGFKVLFVGTDNVAQTLRRQLKPPYYHITHCHTGALALQQLLDKDSSFDLVLSDVSLQDMDGYQFLRDQHLKTNIPHVVIGGRERWSSIKTAFRLGACYVLGEPVNDSEVRNLWQHVCRRREQHDHQPETDDFSNREVDEGSSSLVISRDTSLKGENDIESMNNNHGYQRSSKKRRVVWTKTLHQTFLDAVDYIGLHILHPPDVSVLQHPPPPPPQNPNNLGHLLEPSGNNSDPLIPPDEAFLWSVAHNDPLIYQLSLHQMQPQPPLEQDLSFAGGHQVVPLAMVPPSLPRHGSNMLQQFDENLASGSSHGGNMRITQTLTSGTQHLESSQNLASGSCYANNMKHLDQNLALGFCHGDTIKQLDENLASGSCHGGIFQITTQNLTYDMQYLDLGSGSSHGGNMQEHHQDQNLASGSCYVTATTEGGNNNDLDGIIMTEAELVIGDNDDGFCDNFGNHFDEANPDELIMAQFYMNPVENKGTGSSTSTPADQK 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1156 517 MobiDBLite consensus disorder prediction 146 195 - -
Lele49g1156 517 MobiDBLite consensus disorder prediction 146 163 - -
Lele49g1156 517 MobiDBLite consensus disorder prediction 164 193 - -
Lele49g1156 517 Gene3D - 35 199 - -
Lele49g1156 517 Pfam Response regulator receiver domain 38 136 IPR001789 GO:0000160
Lele49g1156 517 Gene3D - 200 234 - -
Lele49g1156 517 PANTHER TWO-COMPONENT RESPONSE REGULATOR 28 232 IPR045279 GO:0009736
Lele49g1156 517 SUPERFAMILY CheY-like 37 152 IPR011006 -
Lele49g1156 517 SMART REC_2 28 139 IPR001789 GO:0000160
Lele49g1156 517 MobiDBLite consensus disorder prediction 230 245 - -
Lele49g1156 517 MobiDBLite consensus disorder prediction 230 255 - -
Lele49g1156 517 ProSiteProfiles Response regulatory domain profile. 29 143 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1156 Lele-ChrLele49 7654228 7657553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1156 24 229 Response Regulator Gene Family AT4G31920 29.952 5.61e-22 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele49g1156 Response_reg 7.6e-08 CL0304