Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1153 ATGGAGGGTGATAGAATTGGGAGAGAAAATGAGGGAGAGAGACTAATAAGGGAAGATGATGATGATGATCATGGGGTTCTGAAAAAGATGATTTCAAGTCATCCTCTTTATGGCCTTTTGATTGAATCTCACTTCAACTGTTTGAAGGTGGGGTTAGGCGAATTTGGAGAAGAAGAGTTTGATATAACAGATATTGCTGCATATAAGCACAAGGCAAATAATTCTGAGCTCAAAACCACTACAGCTACAACTCCTAGTTCTACAGAACTTGGTCACTTCATGGAAGCATATTGCATGGCGCTTAGCAGCCTGAAAGAAGCGATTGAAGGACCAACAAAAGAAACAAGAGAGTTCATAAACTCAATGCACGTTGAGCTGAAGGAACTATGCAAGCAGAATCATAATAATAATAAGGCACAAGATGCTATAGAGTGCAGCCGCACGAAGAACCTTGGAGGAGGAGGATAG 468 0.4103 MEGDRIGRENEGERLIREDDDDDHGVLKKMISSHPLYGLLIESHFNCLKVGLGEFGEEEFDITDIAAYKHKANNSELKTTTATTPSSTELGHFMEAYCMALSSLKEAIEGPTKETREFINSMHVELKELCKQNHNNNKAQDAIECSRTKNLGGGG 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1153 155 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 11 134 - -
Lele49g1153 155 Pfam KNOX1 domain 27 51 IPR005540 GO:0003677|GO:0005634
Lele49g1153 155 SMART KNOX1_2 25 71 IPR005540 GO:0003677|GO:0005634
Lele49g1153 155 Pfam KNOX2 domain 88 130 IPR005541 GO:0003677|GO:0005634
Lele49g1153 155 SMART KNOX2_2 80 131 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1153 Lele-ChrLele49 7629334 7630570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1153 26 131 Homeobox Transcription Factor Family AT4G08150 31.193 5.80e-12 60.5