Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1152 ATGGTAAAATCGTCCGATAATGGTTTTGGTTCTGTGGCGCCTTTCCTGAAAAAATGTTATGAGATGGTGGATGATGAGTCGACCGACTCGCTCATATCCTGGAGCAAAAGCAATGATAGTTTTATCATCTGGGACATGACTGAGTTCTCCCTGCTTTTGCCTCGGGATGCTCCATCTCCTGGCCCTAGAAACTTGGATTTTTATGTTACAAGAATTGTTGCCCGCTCTGGAAATGTCACAAACTCCACAAATCACCGTGAAATGGACAAATTGAAACAGTTGCACATGACGTGTCTGAAAACTGATACAGATCGCTGGGAATTTGCCAATGATGACTTTATCAGAGGTCAAAAACATTTACTGAGGAATATATTGAGAAGAAAACATCCACATGTTGTAGATCAGCGAAAGCCATCGCAGCAGCAAGAGAACCGTGATGTGCCTTCTCAGGAAGTTAAAAACCATGACCTATGGAAAGAAGTCGAGAATTTGAAAACTGATAGAAGTGCACTCACACAGGAGTTGGTTAAACTTAGGCAGCACCAGGAATCATCGAAGAACAGGTTGCTGTTCCTGACCAATCAGCTTCAAGGAATGGAAAAGAATCAACAACAGATGTTATCATTCTTAGTCATGGCCATGCAAATCCCTGGTTTCATGGTTCAGCTGCTTCAGCCCAAGGAAAACGGTTGGCGTACAACTGAGACAAGCAATATGTTGGAACACAGTGCTTCTGATGGGATGATAATGAAGTATCAACGACCCTTTAGTGGAAAATTGAAGCCTTTAGTTTCATCATCTCGTGTTTCCAATGAGCAACCAGAACCCAGTCTCTGTACGGAGGGGTTGAAAGATTATTTCATCAATTCTGACTTCTTGAAAGTACTCATGGATGAAAAAATGTGTCAAATAGATCATCATTCTCCATTTATTCTACCGGATTCACCCGATGATGATAATGCCTGGGAACAGCTTCTTTTAGGCAGTCCCTTCACTGAAAATGAAGATTCAAATCGGGAAAGTGACAGGCCCACCAACAATGGAATGGAGATTGAGCCGGCCATATGTGAAACACTGTTCGATAAATTCCAAAATTTTGAGGGGTTGATTCCAGAAATGGACAAAACTCAGAAGAGTGGATTGGAAGTATCTGCTAATGATGTTCATTTGGAGAAGCTGCGGAGTTTGGAATCTCTAACTGAGCAAATTGAACTTTTGGCTTATGAATCAAATGAGGAATAG 1242 0.4171 MVKSSDNGFGSVAPFLKKCYEMVDDESTDSLISWSKSNDSFIIWDMTEFSLLLPRDAPSPGPRNLDFYVTRIVARSGNVTNSTNHREMDKLKQLHMTCLKTDTDRWEFANDDFIRGQKHLLRNILRRKHPHVVDQRKPSQQQENRDVPSQEVKNHDLWKEVENLKTDRSALTQELVKLRQHQESSKNRLLFLTNQLQGMEKNQQQMLSFLVMAMQIPGFMVQLLQPKENGWRTTETSNMLEHSASDGMIMKYQRPFSGKLKPLVSSSRVSNEQPEPSLCTEGLKDYFINSDFLKVLMDEKMCQIDHHSPFILPDSPDDDNAWEQLLLGSPFTENEDSNRESDRPTNNGMEIEPAICETLFDKFQNFEGLIPEMDKTQKSGLEVSANDVHLEKLRSLESLTEQIELLAYESNEE 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1152 413 Coils Coil 161 181 - -
Lele49g1152 413 Pfam HSF-type DNA-binding 15 127 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele49g1152 413 SUPERFAMILY "Winged helix" DNA-binding domain 11 127 IPR036390 -
Lele49g1152 413 MobiDBLite consensus disorder prediction 328 349 - -
Lele49g1152 413 SMART hsfneu3 11 127 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele49g1152 413 Gene3D - 9 128 IPR036388 -
Lele49g1152 413 MobiDBLite consensus disorder prediction 130 151 - -
Lele49g1152 413 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 7 259 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1152 Lele-ChrLele49 7621104 7624342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1152 1 412 HSF AT1G67970 38.642 1.30e-67 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele49g1152 HSF_DNA-bind 1.4e-11 CL0123