Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1141 ATGCAAATTAAATGTCAAAACTTGGCGGGTTCCGTTCTAAACGAAACCACTTACGCGGAGTTCTCTATCCGAAATGACATGGAGAAAACACAGCTCAATCTTGGGGCTTCTTTTGGAACTTATCGTCTTGTTTTGGTGCTATCTGTGGCAATTTCGGCTTTGTCTCAGAATGATGCAGAGGTGATGAATATTCTTAAGAAGGCGATCAATACCCCACCTAGTCTCAGATGGACGAACACTGACGTTTGCAAATGGCGACGTGTGGATTGCAACTCTGAGAAACGTGTCATTTCTATTCAGATTGGGAACTTTAATTTGCAAGGTTTCCTTCCGAAAGAACTCGAGAATCTCTCAGAGTTGCAGCTATTTGAATGCCCACAGAACCATCTAACAGGTCAAGTTCCATATTTATCCAAGACACTAGAAAGACTTGTGATCGGAGATAACAAGTTCAGCTCCTTCCCTGATGATTTCTTCAGAGGAATGGCAATGTTACAAGAAGTAAGAATTGGAAATAACCCCTTTTCCCCATGGTCTCTTCCGAATAGTCTCAAGGATTGTGTAGCACTCCAGACATTCGAAGCAACAAATGCAAATTTCATCGGAACAATCCCGGAGTTTTTAGGTACCATGCCAGGTTTAGTTTCTTTAGTCTTGAATTCTAATAGTCTTGAAGGTGGCTTGCCTGAGAGTTTTGCAGATAGGTCAATTGAGGAACTTTTGTTGAACGCTCAAAATGGTAACTACAAACTCAATGGCACAATTAAGGTTCTTCAAAACATGACATCCTTAAAAAAAGTTTGGCTACATGGTAATTCATTTACAGGTCCAATACCAGACTTGTCTAACCATGATCAATTGTTTGATGTGAGTTTAAGGGACAACCAATTGGCTTGTGTTGTCCCATCATCTCTTATGGCTCTTCCAAGTTTACAGGTTGTGAATTTGACCAACAATTTCCTTCAAGGGCCAATTCCAACATTCAAATCAAATGTAGTTGTTGATATATCAGGAAGTAATCGGTTTTGCACAAGCATCCCAAATCAGCCATGTAGTTCTCTCGTGAATGCTTTACTCTCTGTTGTTGAATCCTTAGGATGTCCTGTGAAATTGACTGATAATTGGAAGGGAAATGATCCTTGTAATGGCACTTGGACAGGAATAGTATGTTCTGGGGGAAACGTTTCAATTGTTAATTTTGAGGATATGGGTTTGTCAGGCACAATTTCCCCAACTTTTGCCTCACTTACATCTGTGACAAAATTGCTTCTTGCCAATAACTCACTCACGGGTCCCATGCCAAATGAGCTCACTACCATGCCCAATCTACGAGAGCTAGACGTTTCAAATAACAATTTAGAAGGCTATGTACCATCTTTTCCTAAAAAAAGTATGATTATTAGAAAAGATGGGAATCCTAATCTTGGAAAACTTCTTGATGAATCATCACCTAGCTCAAATTCTGGAGGTAATGGTAATAAGAAAAAAGACCAACTTTCAATATTCATAGCGGGCATCGCGGTTGGCTTGATGATTTTACTTGTTATACTAGTTATAATGTCTTGCATGTTTGTTAGAAAACGTAATTATTTTGGCCAATTTAGAGTTCTAATAACGAAGTTGATACGTCCACGTGATGGAGAAATTGGAAAAGTTATGAAGATCGACGTTGAAGGTGGTGGTGCTAGTAATAAAGGAGATGTCCAAGGTATGGTAATCCCAATTCAAGTTCTGAAACAAGTCACTAACAATTTTAGTAACGCAAACATATTAGGAAAAGGTGGTTCTGGAACTGTGTACAAAGGTGAACTACATGATGGAACAAAGATCGCAGTGAAAAGAATGGATTCAGGATTGTTAATGGAGAAGGCACTACATGAATTCCGAGCCGAAATCTCGGTGCTTACGCAGGCTCGTCACAAACATTTGGTGGCACTTTTGGGATATTGCTTAGATGGAAATGAGAAGCTTCTTGTGTATGAATACATGCCTCAAGGAGCACTTAGTAAGCATTTGTATAGTTGGAAAGAGAATGGATTGGAACCTCTGGATTGGACAAAAAGATTGAACATTGCCTTGGATGTAGCTAAAGGAGTTGAGTATCTTCATGCTTTAGCTCAACATAGTTTTATTCACAGAGATCTTAAACCATCCAACATTCTTCTTGGAGATGATATGCGAGCTAAAGTATCAGACTTCGGATTAGTCCGGCTCAATGCTGAAGGAAGAAATTCTGTCGAAACTAGGCTTGCCGGAACTTTCGGATATCTTGCACCTGAGTATGCAGCAACTGGGCGAGTCACTACAAAGGTTGATGTTTATAGTTTTGGAGTGGTTCTTATGGAGATGATAACAGGGAGGAGAGTGCTTGACGATAGCCTACCAGAGGAAGACTTCCACCTGGTAATGTGGTTCCGACGAACGATGCAGAACAACGACTCGTGTCGAAAGGTGATTGATCCTGTCATTGATGCTGATGATGGAGCAATCATGTCAAGCATTAGGACTGTGTCAGAGTTGGCTGGCCATTGCTGTGCAAGTGAGCCTCATCAACGTCCTGACATGGGCTATGTAGTAAATGTACTATCTTCTCTGGTTCATCAGGCTGCATGGAAGCCAATGGAATCAAATTGTTCTGATGATAATGATGCTAATAAGTATGGCATTGATCTTCATATGAGTTTGCCTCAAGCACTTACAAAGTGGCAATCTTTGGAAGGACAAAGCAGTTCTCAATCATTTCTCACAAAATAA 2754 0.4031 MQIKCQNLAGSVLNETTYAEFSIRNDMEKTQLNLGASFGTYRLVLVLSVAISALSQNDAEVMNILKKAINTPPSLRWTNTDVCKWRRVDCNSEKRVISIQIGNFNLQGFLPKELENLSELQLFECPQNHLTGQVPYLSKTLERLVIGDNKFSSFPDDFFRGMAMLQEVRIGNNPFSPWSLPNSLKDCVALQTFEATNANFIGTIPEFLGTMPGLVSLVLNSNSLEGGLPESFADRSIEELLLNAQNGNYKLNGTIKVLQNMTSLKKVWLHGNSFTGPIPDLSNHDQLFDVSLRDNQLACVVPSSLMALPSLQVVNLTNNFLQGPIPTFKSNVVVDISGSNRFCTSIPNQPCSSLVNALLSVVESLGCPVKLTDNWKGNDPCNGTWTGIVCSGGNVSIVNFEDMGLSGTISPTFASLTSVTKLLLANNSLTGPMPNELTTMPNLRELDVSNNNLEGYVPSFPKKSMIIRKDGNPNLGKLLDESSPSSNSGGNGNKKKDQLSIFIAGIAVGLMILLVILVIMSCMFVRKRNYFGQFRVLITKLIRPRDGEIGKVMKIDVEGGGASNKGDVQGMVIPIQVLKQVTNNFSNANILGKGGSGTVYKGELHDGTKIAVKRMDSGLLMEKALHEFRAEISVLTQARHKHLVALLGYCLDGNEKLLVYEYMPQGALSKHLYSWKENGLEPLDWTKRLNIALDVAKGVEYLHALAQHSFIHRDLKPSNILLGDDMRAKVSDFGLVRLNAEGRNSVETRLAGTFGYLAPEYAATGRVTTKVDVYSFGVVLMEMITGRRVLDDSLPEEDFHLVMWFRRTMQNNDSCRKVIDPVIDADDGAIMSSIRTVSELAGHCCASEPHQRPDMGYVVNVLSSLVHQAAWKPMESNCSDDNDANKYGIDLHMSLPQALTKWQSLEGQSSSQSFLTK 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1141 917 Gene3D Ribonuclease Inhibitor 353 478 IPR032675 -
Lele49g1141 917 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 663 876 - -
Lele49g1141 917 ProSitePatterns Serine/Threonine protein kinases active-site signature. 710 722 IPR008271 GO:0004672|GO:0006468
Lele49g1141 917 Pfam Leucine Rich Repeat 442 459 IPR001611 GO:0005515
Lele49g1141 917 Gene3D Transferase(Phosphotransferase) domain 1 663 887 - -
Lele49g1141 917 FunFam Leucine-rich repeat receptor-like kinase 353 478 - -
Lele49g1141 917 Gene3D Ribonuclease Inhibitor 55 349 IPR032675 -
Lele49g1141 917 ProSiteProfiles Protein kinase domain profile. 585 870 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g1141 917 CDD STKc_IRAK 591 865 - -
Lele49g1141 917 FunFam Receptor-like kinase TMK4 56 348 - -
Lele49g1141 917 PANTHER OSJNBA0070M12.3 PROTEIN 44 910 - -
Lele49g1141 917 Pfam Leucine rich repeat N-terminal domain 56 91 IPR013210 -
Lele49g1141 917 Pfam Leucine rich repeat N-terminal domain 356 391 IPR013210 -
Lele49g1141 917 SUPERFAMILY Protein kinase-like (PK-like) 574 874 IPR011009 -
Lele49g1141 917 Gene3D Phosphorylase Kinase; domain 1 561 662 - -
Lele49g1141 917 Pfam Protein tyrosine and serine/threonine kinase 589 860 IPR001245 GO:0004672|GO:0006468
Lele49g1141 917 SMART serkin_6 585 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g1141 917 SUPERFAMILY L domain-like 63 458 - -
Lele49g1141 917 ProSitePatterns Protein kinases ATP-binding region signature. 591 613 IPR017441 GO:0005524
Lele49g1141 917 FunFam receptor-like protein kinase FERONIA 554 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1141 Lele-ChrLele49 7561396 7565000 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1141 96 865 Receptor kinase-like Gene Family AT5G07280 30.637 6.05e-82 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lele49g1141 PK_Tyr_Ser-Thr 6.2e-46 CL0016