Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1140 ATGGCGCGATCCGCTCTTACTGCAAAATGCCTCCCCACTCATGCGGAGTTCCCCCTGCTGATTTTCCCGGGAAATGACATGGAGAAACCCCAAATCGGTTTTGGGGTTTCTTTTGTAATTTATCGTCTGATTTTGGTGTTGTCTGTGGCGATTTTGGCTGTGTCTCACAATGATGCAGCGGTGATGAATATTCTTAAGGCGGCAATCAATGCCCCACCTAGCCTCGGATGGACGGACAAGGACGTCTGCAAATGGCAACGTGTGGATTGCAATTCTGGAAAGCGAGTCATTGCCATTCAGATCGCGAACTTGAATTTGCAAGGTTTGCTTCCTAAAGAACTTGAGAATCTCTCGGAGTTGCAACGATTTGAATGCCCACAGAACGGGCTCACAGGTCCAGTTCCATATCTATCCAAGACATTGCAAAAACTTGTGATCCGAGATAACAAGTTCAGCTCCATCCCTAATGATTTCTTCAAGGGAATGTCAATGTTACAAGAAGTAAGAGTTAGAAATAACCCATTTTCGCGATGGCCTATTCCGAATAGTCTTAAGGATTGCGTAGCACTCCAGACATTCGTAGCAACAAATGCAAATTTGGTTGGAACGATCCCTGATTTTTTAGGTACCATGCCAGGTTTAGTTTCTTTAGTGCTGAATTCTAATAGTCTTGAAGGTGGCTTGCCGGCAAGCTTTGCAAAGAGTTCAATCGAGGAACTTTGGTTGAATGCACAAAATGGTAATCATAAACTTAATGGCACAATTGATGTGTTGCAGAACATGACATCCTTAAAACTAGTTTGGCTACATGATAATTCATTTACTGGTAAAATACCAGACATGTCAACACATGATCAGTTGTCTGATGTGAGTTTAAGGGACAACCAATTGGCTTGTGTTGTCCCATCATCTCTTATGGCTCTTCCAAGTTTAAAGGTTGTGAATTTGACCAACAATTTCCTTCAAGGGCCCATTCCAACATTTAAATCAGGTGTAACTGTTGATATGTCTGGGATTAATCGGTTTTGCACAAATATCCCAAATCAGCCATGTAGTCCTCTTGTGAATGCTTTACTCTCTGTTCTTGAACCCTTAGGATGTCCTGTGAAATTGGCTGATAATTGGAGGGGCAATGATCCTTGTAATGGTAGTTGGACAGGAATAGTGTGCGCTGGGGGTAACATTTCAATTATCAATTTTCAGAACATGGGCTTATCAGGCACTATTTCTCCTAATTTTGCCTTACTCACTTCTGTCACAAAATTGCTTCTTTCTAATAATTCACTCACGGGTCCTATACCAAATGAGCTCACTACAATGCCCACTCTAAAAGAGCTAGATGTTTCAAATAACAATTTAGGAGGTTTTGTGCCATCTTTTCGTCAACCAGGTATAGATCTTAAAACATATGGGAATCCTGATCTTGGAAAACCTCTTAAATCACCTGGCTCATCAGATTCTGAAGGTAATGGTGCCCATGAGAATAACAAACTCGCTGCATTCATTATTGGCATTGTGGTTGGCTTAGTGATTTTATTTGCTATAGCAACTCTGGTGTTCCTTAGGTTTCTTAAGAAACGTAATTATTCAGGCAAGTTTGGAGGTCTAATAGCGAAGCTAATAGGTCCTCGTTATGATGGAGCTGGGAAAGGTATGAAAATTAATGTTTCAGGTGTTGTTGATACTCCTAGTCATGGTGATGCCCAAAGTATGGTAATTCCAATTCAAGTTCTGAGAGAAGTCACTGGCAATTTCAATAGTGCAAACATACTAGGAAAGGGTGGTTTTGGCACTGTTTACAAAGGTGAACTGCAAGATGGAACAAAGATGGCAGTCAAAAGAATGGAATCAGGATTGTTGATGGAGAAGGGACTGAGTGAATTTCGAGCTGAACTCTCAGTGCTTACGCAGGCTCGCCACAAACATTTGGTGGCACTTATGGGATATTGCTTGGAGGGAAATGAGAAGCTTCTTGTGTATGAATACATGCCCCAAGGACCACTTAGCAAGCATCTGTTTAGCTGGAAAGTGAGTGGATTGGAACCTCTGGATTGGACAAGAAGACTAAGCATTGCCTTGGATGTAGCTAGAGGTGTTGAGTATCTCCATACTTTGGCTCAACAAAGCTTTATTCATAGAGATCTTAAGCCATCCAACATTCTTCTTGGAGATGATATGCGTGCTAAAGTATCAGATTTTGGATTAGTCCGGCTTGCTCCTGAAGGAAGACATTCAGTTGAAACTAGGCTTGCTGGAACTTTCGGATATCTTGCACCCGAATATGCAGCAACTGGGCGAGTTACTACTAAGGTTGATGTGTACAGTTTCGGAGTGGTGGTAATGGAGATGATAACGGGGAGGAGAGTGCTTGATGATAGCCTACCAGAGGAAGACTTCCACCTGGTGACGTGGTTCCGGCGGATGATGCAGAACAATGACAATGACTCGCTTCGAAAGCTCATCGATCCCACCATTAATGCCGATGATGAAGCAACCCTGTCGAGCATTAGGACGGTGTCAGAGTTGGCCGGACATTGCTGTGCAAATGAGCCTCATCAACGTCCCGACATGAGCCATGTGGTGAATGTACTATCGCCTCTGGTTCAGGCATGGAAGCCCCAAGAATCTGGTGATGATGGCGGCAAGTATGGCCTTGACTTGGATCTGAGTTTGCCGCAAGCACTCAGAAAATGGAAATCTTTGGAAGGAAATAGCACAGTGGTGGAAGGATCGTATGCTTCTCAATCATTTGTCACAAAATAA 2763 0.43 MARSALTAKCLPTHAEFPLLIFPGNDMEKPQIGFGVSFVIYRLILVLSVAILAVSHNDAAVMNILKAAINAPPSLGWTDKDVCKWQRVDCNSGKRVIAIQIANLNLQGLLPKELENLSELQRFECPQNGLTGPVPYLSKTLQKLVIRDNKFSSIPNDFFKGMSMLQEVRVRNNPFSRWPIPNSLKDCVALQTFVATNANLVGTIPDFLGTMPGLVSLVLNSNSLEGGLPASFAKSSIEELWLNAQNGNHKLNGTIDVLQNMTSLKLVWLHDNSFTGKIPDMSTHDQLSDVSLRDNQLACVVPSSLMALPSLKVVNLTNNFLQGPIPTFKSGVTVDMSGINRFCTNIPNQPCSPLVNALLSVLEPLGCPVKLADNWRGNDPCNGSWTGIVCAGGNISIINFQNMGLSGTISPNFALLTSVTKLLLSNNSLTGPIPNELTTMPTLKELDVSNNNLGGFVPSFRQPGIDLKTYGNPDLGKPLKSPGSSDSEGNGAHENNKLAAFIIGIVVGLVILFAIATLVFLRFLKKRNYSGKFGGLIAKLIGPRYDGAGKGMKINVSGVVDTPSHGDAQSMVIPIQVLREVTGNFNSANILGKGGFGTVYKGELQDGTKMAVKRMESGLLMEKGLSEFRAELSVLTQARHKHLVALMGYCLEGNEKLLVYEYMPQGPLSKHLFSWKVSGLEPLDWTRRLSIALDVARGVEYLHTLAQQSFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGRHSVETRLAGTFGYLAPEYAATGRVTTKVDVYSFGVVVMEMITGRRVLDDSLPEEDFHLVTWFRRMMQNNDNDSLRKLIDPTINADDEATLSSIRTVSELAGHCCANEPHQRPDMSHVVNVLSPLVQAWKPQESGDDGGKYGLDLDLSLPQALRKWKSLEGNSTVVEGSYASQSFVTK 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1140 920 FunFam receptor-like protein kinase FERONIA 552 662 - -
Lele49g1140 920 ProSitePatterns Serine/Threonine protein kinases active-site signature. 710 722 IPR008271 GO:0004672|GO:0006468
Lele49g1140 920 Gene3D Ribonuclease Inhibitor 55 348 IPR032675 -
Lele49g1140 920 SMART serkin_6 585 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g1140 920 SUPERFAMILY Protein kinase-like (PK-like) 569 872 IPR011009 -
Lele49g1140 920 Gene3D Transferase(Phosphotransferase) domain 1 663 880 - -
Lele49g1140 920 Gene3D Phosphorylase Kinase; domain 1 554 662 - -
Lele49g1140 920 Pfam Leucine Rich Repeat 443 459 IPR001611 GO:0005515
Lele49g1140 920 Pfam Protein tyrosine and serine/threonine kinase 589 864 IPR001245 GO:0004672|GO:0006468
Lele49g1140 920 ProSiteProfiles Protein kinase domain profile. 585 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g1140 920 PANTHER OSJNBA0070M12.3 PROTEIN 43 908 - -
Lele49g1140 920 Pfam Leucine rich repeat N-terminal domain 57 91 IPR013210 -
Lele49g1140 920 Pfam Leucine rich repeat N-terminal domain 373 390 IPR013210 -
Lele49g1140 920 FunFam Leucine-rich repeat receptor-like kinase 353 478 - -
Lele49g1140 920 CDD STKc_IRAK 591 867 - -
Lele49g1140 920 FunFam Receptor-like kinase TMK4 56 348 - -
Lele49g1140 920 FunFam receptor protein kinase TMK1 663 882 - -
Lele49g1140 920 MobiDBLite consensus disorder prediction 471 490 - -
Lele49g1140 920 Gene3D Ribonuclease Inhibitor 354 477 IPR032675 -
Lele49g1140 920 ProSitePatterns Protein kinases ATP-binding region signature. 591 613 IPR017441 GO:0005524
Lele49g1140 920 SUPERFAMILY L domain-like 83 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1140 Lele-ChrLele49 7556579 7560106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1140 110 867 Receptor kinase-like Gene Family AT5G65700 31.297 1.31e-83 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lele49g1140 PK_Tyr_Ser-Thr 2.3e-46 CL0016