Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1139 ATGGGTGAGGAGGAGAAGGAATTGATTAGCTTAAAGCGTGAGGCAAAGCTCAAAGGTGGATTCTATGTTGATCCAGAAGCTAAACTTCTATTTATTATTCGCATTCGTGGTATCAATGCCATGCATCCAAAGACTAGGAAGATCTTGCAGCTATTGCGTTTGAGACAGATCTTCAATGGTGTATTCCTTAAAGTTAACAAAGCCACAATGAACATGCTGCACAGAGTCGAACCTTATGTGACTTATGGATACCCAAATCTGAAGAGTGTTAGAGAACTTATTTACAAGAGGGGTTATGGTAAGGTCAACAAGCAGAGAATTGCTTTAACTGACAACTCCATCTTTGAGCAGGAACTGGGCAAACATGGAATCATTTGCACTGAGGATCTTATCCATGAGATCATGACAGTGGGTTCCCACTTTAAGGAAGCCAACAACTTCCTTTGGCCATTTAAGCTCAAGGCTCCTTTAGGCGGACTCAAGAAGAAGAGAAACCACTATGTTGAAGGAGGCGATGCAGGAAACAGAGAGAATTACATAAATGAGCTCATCAGGAGAATGAACTAG 567 0.4162 MGEEEKELISLKREAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKVNKQRIALTDNSIFEQELGKHGIICTEDLIHEIMTVGSHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1139 188 FunFam 60S ribosomal protein L7 29 133 - -
Lele49g1139 188 TIGRFAM uL30_euk: 60S ribosomal protein uL30 3 188 IPR005998 GO:0000463|GO:0003735|GO:0022625
Lele49g1139 188 CDD Ribosomal_L7_archeal_euk 29 188 IPR035808 -
Lele49g1139 188 Pfam Ribosomal protein L30p/L7e 30 80 IPR016082 -
Lele49g1139 188 Gene3D - 133 188 IPR036919 -
Lele49g1139 188 Gene3D - 29 132 IPR036919 -
Lele49g1139 188 ProSitePatterns Ribosomal protein L30 signature. 48 80 IPR018038 -
Lele49g1139 188 PANTHER 60S RIBOSOMAL PROTEIN L7 3 188 IPR039699 -
Lele49g1139 188 FunFam 60S ribosomal protein L7 134 188 - -
Lele49g1139 188 SUPERFAMILY Ribosomal protein L30p/L7e 29 188 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1139 Lele-ChrLele49 7553181 7554615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1139 2 188 Cytoplasmic Ribosomal Protein Gene Family AT2G44120 88.770 1.66e-123 347