Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1127 ATGCCATACTCTCAACCTCAGCTGAAGGGGAAAATTCATGCAACCTCCCTCAACTTTGTAAGCTTAGGTGGTCAAGAAATAGTAGATGGCCGGCTATTGGCGGCACTGAGAGCACTTCTTGCGATTGACATGGAGGCTGTGCAGAACTGTGACCTTAGCACTCTAAAGTCTCTAGCTGCTGAAGCTCCTATTGGTATTGCAAATGAAGTAGCAGCCCTGCGAACAACAATTGCTTTGTGTGTCATTGCATTGGGACACTTCCCCACCAAGATAATGGACGATGAGTCATTATTGAAACAGGGTGCTTCAGGTTCAACAGAGCTGGCCATTCAGTTCAGGATTCAAAAGAAATCTGTGATTATTGATGTGATGAGAGATCTGACAAGGAGGGTGAAGCTTCTCTCATCAAAGGAAAAAGTCACTGCTGAAAGTTGA 435 0.4506 MPYSQPQLKGKIHATSLNFVSLGGQEIVDGRLLAALRALLAIDMEAVQNCDLSTLKSLAAEAPIGIANEVAALRTTIALCVIALGHFPTKIMDDESLLKQGASGSTELAIQFRIQKKSVIIDVMRDLTRRVKLLSSKEKVTAES 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1127 144 Pfam Rubisco LSMT substrate-binding 21 119 IPR015353 -
Lele49g1127 144 Gene3D - 5 141 IPR036464 -
Lele49g1127 144 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 23 139 IPR036464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1127 Lele-ChrLele49 7475559 7476540 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g1127 49 7475559 7476540 Lele49g1127 49 7475559 7476540 ECH
Lele49g1127 49 7475559 7476540 Lele51g1148 51 7588736 7592566 hybridization
Lele49g1127 49 7475559 7476540 Lele52g1671 52 20336705 20340496 hybridization