Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1113 ATGATGAACGAGGGTTCGTTTGCGAATGGAGGGGCTAATACGGCGCCGTTTAACCTGGCGGATATCTGGCAATTTCCAATGAATGTCGGTGCGGGTCTCGGGGATTCCGGGGGTGGGTTGGGGCTGAGGAGGCCACAGTTCGGCCATAATTTTGGGCCGCCGCCGTTCGGTGATTTTCCTGATCATACGAATCGGGATGTACCCGGTAATGATCAAATCAGCTCGGAGCAGAGAGTGAATAATAATAACAATAATAGGAAGTGTCGTGATTCCGAGGATGAGTCCACCAAGGGCGTCTCCACCAGTAATGGCGGCAATGGCGTGAATGATGGTGGTGAAGGAAAACGGCTTAAAGCTTCAGCGAATAGGAATGAGAGTCGAGACACTAAAGCTGAAGCAGAGCCCAGTTCAGGAAAGCCTGCGGAACAAAATAACCAGCAACCTCCTCCTGAGCCTCCTAAGCAAGATTACATTCATGTTCGAGCAAGAAGAGGTCAAGCTACTGATAGCCACAGTCTAGCAGAAAGAGCTAGAAGGGAGAAGATAAGTGAGAGGATGAAAATTCTTCAGGATTTGGTCCCTGGTTGTAATAAGGTTATTGGGAAAGCACTGGTCCTTGATGAGATTATAAATTATATCCAATCACTACAGCGCCAAGTTGAGTTCCTGTCTATGAAACTTGAAACTGTAAATTCAAGACTGAACCCTGGCATCGAAGTCTTTCCTCCTAAAGATTTTGGTCAACAATCATTTGAAACGGCTGGCATGGCATTTGGCTCACAAGCTACAAGAGAGTATAGCCGGGGTTCGTCGCCAGAGTGGTTACATATGCAGGTAGGTGGTGGTTTTGAAAGAACGTCTTAG 864 0.4745 MMNEGSFANGGANTAPFNLADIWQFPMNVGAGLGDSGGGLGLRRPQFGHNFGPPPFGDFPDHTNRDVPGNDQISSEQRVNNNNNNRKCRDSEDESTKGVSTSNGGNGVNDGGEGKRLKASANRNESRDTKAEAEPSSGKPAEQNNQQPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLETVNSRLNPGIEVFPPKDFGQQSFETAGMAFGSQATREYSRGSSPEWLHMQVGGGFERTS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1113 287 MobiDBLite consensus disorder prediction 40 156 - -
Lele49g1113 287 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 164 234 IPR036638 GO:0046983
Lele49g1113 287 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 72 257 IPR024097 GO:0006355
Lele49g1113 287 CDD bHLH_AtBPE_like 156 241 - -
Lele49g1113 287 Pfam Helix-loop-helix DNA-binding domain 170 217 IPR011598 GO:0046983
Lele49g1113 287 Coils Coil 213 233 - -
Lele49g1113 287 MobiDBLite consensus disorder prediction 116 135 - -
Lele49g1113 287 FunFam Basic helix-loop-helix transcription factor 163 235 - -
Lele49g1113 287 MobiDBLite consensus disorder prediction 67 82 - -
Lele49g1113 287 Gene3D - 163 237 IPR036638 GO:0046983
Lele49g1113 287 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 166 216 IPR011598 GO:0046983
Lele49g1113 287 SMART finulus 172 222 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1113 Lele-ChrLele49 7376720 7379011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1113 1 245 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 57.895 1.86e-75 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele49g1113 HLH 2.3e-08 No_clan