Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1111 ATGTCGGTTCTAATCGTCACCAGCTTAGGAGATATAGTGGTAGATTTGTACTCCGACAAATGCCCCTTGACGACTAAGAATTTCTTGAAGCTTTGCAAGATTAAGTACTATAATGGATGTCTATTTCACACCGTTCAGAAAGATTTCACTGCGCAGACTGGTGATCCAACTGGAATTGGTAGTGGTGGTGATTCGGTTTACAAATTTCTCTATGGTGATCAAGCTCGTTTTTTTAGTGATGAGATTCATATTGATTTAAAGCATTCTAAGACTGGTACAGTTGCCATGGCTAGTGCTGGAGAGAACCTGAATGCTTCCCAGTTCTACATCACTCTGCGAGATAATCTTGATTACCTTGATGGAAAGCACACTGTTTTTGGCGAGGTAGCTGAAGGACTTGACACTTTGACTAGAATAAATGAGGCTTACGTGGATGAGAGTGGGAGACCTTATAAAAATATCCGAATCAAACACACTTACATCTTAGATGACCCTTTTGACGATCCTCCTCAGCTAGCTGAGTTCATTCCTGACGCTTCACCAGAAGGAAAGCCAAAAGATGAGATTCTTGATGAAGTGCGGCTTGAAGATGATTGGGTGCCCATGGATGAACAATTAGATCCAGTAGAGCTTGAAGAGGTTATTAAGTCAAAGCAAGCACATTCTAGGGCTGTTGTCCTTGAGAGTATTGGAGATATTCCTGATGCTGAGATCAAGCCTCCTGACAATGTGCTATTTGTTTGTAAATTGAACCCAGTTACTGAGTGTTTTTTATGTCTTTTTTATTATTAA 792 0.4053 MSVLIVTSLGDIVVDLYSDKCPLTTKNFLKLCKIKYYNGCLFHTVQKDFTAQTGDPTGIGSGGDSVYKFLYGDQARFFSDEIHIDLKHSKTGTVAMASAGENLNASQFYITLRDNLDYLDGKHTVFGEVAEGLDTLTRINEAYVDESGRPYKNIRIKHTYILDDPFDDPPQLAEFIPDASPEGKPKDEILDEVRLEDDWVPMDEQLDPVELEEVIKSKQAHSRAVVLESIGDIPDAEIKPPDNVLFVCKLNPVTECFLCLFYY 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1111 263 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 7 161 IPR002130 GO:0000413|GO:0003755
Lele49g1111 263 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 4 159 IPR002130 GO:0000413|GO:0003755
Lele49g1111 263 FunFam Peptidyl-prolyl cis-trans isomerase 1 172 - -
Lele49g1111 263 Gene3D - 1 172 IPR029000 -
Lele49g1111 263 CDD cyclophilin_RRM 4 169 IPR035538 -
Lele49g1111 263 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4 1 255 IPR035542 -
Lele49g1111 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 136 IPR002130 GO:0000413|GO:0003755
Lele49g1111 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 16 31 IPR002130 GO:0000413|GO:0003755
Lele49g1111 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 92 107 IPR002130 GO:0000413|GO:0003755
Lele49g1111 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 54 IPR002130 GO:0000413|GO:0003755
Lele49g1111 263 SUPERFAMILY Cyclophilin-like 1 178 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1111 Lele-ChrLele49 7342617 7347574 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1111 3 166 U-box Gene Family AT5G67530 39.634 3.22e-32 122