Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1105 ATGTCACGGGACGGCGACGTCGGTTCGTCGACTGCAGGAGCCTTCAGGCGCCGCTGGGACGTCATCCTGAGCTGCAGAAGTACGGATGATTGTGGTCGCTTCACCAAATCCCTCTACGACGCTTTCCAATCTCGGGGCGTTCGGGTTTTTCTGGATGACTTTGGATTGGATCGCGATGACCAGATAGCCCTGAGTTCGCTCGAAGCTATCGATGACTCGGTCGCTTCAATCATAATCGTCTCTCCTAACTACGCTTCTTCTCATTGGTGCCTGGAGAAGCTTGCTAAGATTTGGGAGTGCAGGAGACTGATTCTGCCGGTGTTCTTCAACGTCGACCCGCGTGATGTCCGGAAACAAGGGGGTCCATTCAAAGATTCTTTCGAGGATCACAAAGCCAAGAGGAGTGAAGAAGAGGTTCTAAGGTGGAGGGAAGCTATGAAGAAAGTAGGTGGAATTGCAGGTTTCGTTTTTCCGAATCACAGAGAAAAGGAAGATGACCAAATTCGAGTTATAGTGAAAAGGATTCTGAGAGAACTGAGTAATACTCCTGTGGGTGTGGCTGAATTTACCGTCGGACTCGATGCTCGATTTGAAGAATTGTTGGAATCATTAGACTTGAGATCCAACGGCATAAGAGTTTTGGGATTGTATGGGATGGGAGGGGTTGGTAAGACAACACTTGCAAAAGCTCTTTTTAACAGACTCGTTGTGCATTTTGAGCATCGCAGCTTCATTTCAAGTGTTAGAGAAGTTTCATCCAAAGATGGAGGATTAATTGCTCTAAGAAACAGAATTATCAGTGACATTTCCTCTCAAGTAGTTGTTGGTGATGATATTTCCGCTTTTAGAAGGGCGATTGATAAATATCGAGTTCTGATAATCCTGGATGATGTGGATGATGTGAAGCAACTCGATACTCTAATAGGAAACAAAGAATGGTTCCATGAGGGAAGCCGTATAATAGTCACCTCAAGGGATAAACGAGCTTTGCCTGAGACTCATGTTAATGTCTCCTACGAGGTTAAGGTATTGAATGACTCTGATTCATTAGAACTATTCTGTTACCATGCAATGAGAAGAAATGAACCTGCAGACGAAATTCTTTTGAAGTTGTCGAAGGAGATCGTGTCTCTAACGGGAGGGTTGCCTTTGGCTCTGGAAGTGTTTGGTTCAATGTTGTTTGGGAAGAGAAGGGAAGAGGAATGGGTTGATGTTGTGGAGAAGCTGAAGTTGATTCGACCTGGGAACTTACATAAAGTGTTGAGGACCAGTTATGATGGGTTAAATGAACAAGAGAAATGCATCTTCCTTGACATTTCTTGTTTGTTCGTTCAGATGAGGATGAAGCGAGCAGATGTGATTGATATACTGAGAGGTTGTGGATTTAAGGGAGAGGAAGCAATCACAGTTCTCTCAGAAAAATGTCTGATCAAAATCAGGGAGGATGAAACCATTTGGATGCATGATCAAATTAGAGACATGGGATGGCAAATTGTTGTAGACGAAAACCTTGTTGATCCTGGTATGCGTAGTAGATTGTGGGATCGTTCTCAAATTCTTGCTGTTTTGAGGAATTTTAAGGGAACGAGCAGAACTCATGGGATGGTCCTAGACTTCGAGGAAGGAGATGCTAAAAATCATAAAGGTGATGAAGCAATTTCTGGGAAAAACCTTCTATGTGGTTCCAGTTTCTTCGCGAATGTTGTGACATTCCTTAAGCAGATGCATAAGAAATCTTTTCAACGAGTTGAGAGTGACCAAGAGGCCGTAGTTCTTCACACCAAGTCCTTTAAATCAATGGTGAAGTTGATGCTGCTTCAGATCAATAATTTGAGACTGGAAGGGAAGTTCAAATCTTTCCCCGCAAAATTAAAGTGGCTACAATGGCAAGGATGTCCATTAAAATGCATGCCTTCTGATTTTTGGCCCCGAGAATTGGCTGTCCTTGATCTCACACGCAGCAATGTTGAGAAATTGTGGGATCGGAAAGGCTCCAAGGTGCCTGAGAACATAATGGTCTTGAACCTCTCCGACTGCTACCACCTGGAGGCTCTTCCTGATCTCTTTGGCTGCCGACATTTAGAGAAGATTGTTCTAGTGACCTGCAAGAAACTAAGTAGGATTCACGAATCAGTAGGCAATCTGATCACACTTCGTCATTTGAATCTGACTCGTTGTGAAGAACTTACTGAGTTACCCAATGATATATCTGGGCTTAAAAATCTTGAGAGCCTCTGTCTCTCTGACTGCTATAAGTTCAAATCGTTACCCAGAAACATGGCCAACCTGAAATCTCTAAGAAAACTTCTTGCTGATGGAACGGCTATAGAAGAGCTGCCCCAGACTATTCTTGGTCTTGATAAACTTGAAATTCTTCTTTTAAATGGCTGCCAAAACTTAAAAAGACTACCCAACAACATAGGACTTTTGTGTTCTCTGCAAGAGCTGTCTCTCGATAAATCTGGATTAGAAGAACTACCCAACTCTGTTGGACATTTGAAAAAACTTGAGAGGCTTGGTTTGATATACTGCAAATCTCTCACTGAGATTCCTGATTCTATTGGAGATCTCGTATCACTTCCAAAGCTTCAGCTTAATGGTAGTGCTATTGAAGAGCTTCCTTCTTCGATTGGATTATTGTCTTGTATAAATGAACTCTCTGTAGGATACTGTAAGTTCCTGAAAAAATTGCCCGAATCTATTAAGCTTTTGGCTTCCGTAGTGGAGCTTCAGCTAGATTGGACAGCGATCACAGATTTGCCAAATGAGATTGGGGATATGAGGTTACTAAGAAACCTTCAAATGAGAAATTGCCAGATGAGAACTCTGCCTGAATCCATCGGCCACCTTGCAGCTCTTACAACTTTGAATATTTCCAGTGGAAAGATCGAGGAATTGCCGGAGTCCATTGGAATGCTTGAAAATCTTGTTCGTTTAAGGTTGGACGAATGCAGATTACTAAGAAAGCTTCCTGATTCTATAGGATCTTTGAAGTCCTTGCGTCATCTTGGTTTAGAGGAAACGGGTCTGACAGAATTACCTAAAAGCTTTGGTATGCTTACCAACTTAACGACATTGAAAATGGCCAATAAGTCTGAAAACAACTTGCTTGAGGATTCTTCTGTAATCTCATCTTTATTCTGCAATATGATCTCTCTGAATTATCTAGATGCTAGTCGTTGGAGAATATCTGGAAAAATTCCTGATGATTTTGAGAACTTGTCGTCTTTGGAGACTTTGAATCTAAGCCAAAACAAATTTCACAGCCTTCCTTCCAGTATGGCGGGCCTTTCCATTCTCAAGGAACTTCGTCTTGAGAACTGCATCGAGCTGGTTTCTCTCCCTGCTCTTCCCTCAAGCTTGACAAAGCTGAATGCTGCAGACTGTTGTAACTTACAAAGCATTCATGACCTTTCAAATTTAACAAATTTGCAGGATCTAAACTTCACCAATTGTGTAAAATTGGTGGATATTCCTGGTCTTGAACGGTTAGGATCTTTGAGGAAATTGTTCTTTGGTGGATGCATGACATGCTCCAGCACAATCCGTAAGAGATTTTCCAAGGTTACACTGAGGAATTTAAGGAACTTGAGCATGCCAGCTACAAGATTACCCAAATGGTTTTCTGGGCAATCTGTAAGCTTTTCAAAGCCCAAGAACCGTGAGCTAACAGGTGTAATTATAGGTATCATTCTTTCAATCAACCGTGATATACCTAGTGAAAAGCGAGATCTTCTTCCTGGAGTAGTTGATATAAAAGCAAATGTCATCAAACATGGCGAAACTGTGCATACTTCAGTATTGGACTTGCGTGGGTTGCCAAGAACGAATGAAGAACACATACACCTTTGCAGGTACCCTGATTACTCTCGATTCATCTCTGTGATGCGACACGGTGACACAATTTGTGTTACACAGAGAGACCCACCTTTGGATAAGGGCTTAGAGCTGAAGAAATGTGGGATTAATTTGATCTTTGAAGGGGATGACGATTTTGGTGGAGATGAAGAATCTGTGGACCCAAGTTTACAATCTATGTCAGAAAAATTGGCCAAGTTTTTCAACACTTGTGAAGAAGATAACTCCAAAGATGGAATTGAGAGTGATGATGATGATGAGTGCCAAATGTAA 4131 0.421 MSRDGDVGSSTAGAFRRRWDVILSCRSTDDCGRFTKSLYDAFQSRGVRVFLDDFGLDRDDQIALSSLEAIDDSVASIIIVSPNYASSHWCLEKLAKIWECRRLILPVFFNVDPRDVRKQGGPFKDSFEDHKAKRSEEEVLRWREAMKKVGGIAGFVFPNHREKEDDQIRVIVKRILRELSNTPVGVAEFTVGLDARFEELLESLDLRSNGIRVLGLYGMGGVGKTTLAKALFNRLVVHFEHRSFISSVREVSSKDGGLIALRNRIISDISSQVVVGDDISAFRRAIDKYRVLIILDDVDDVKQLDTLIGNKEWFHEGSRIIVTSRDKRALPETHVNVSYEVKVLNDSDSLELFCYHAMRRNEPADEILLKLSKEIVSLTGGLPLALEVFGSMLFGKRREEEWVDVVEKLKLIRPGNLHKVLRTSYDGLNEQEKCIFLDISCLFVQMRMKRADVIDILRGCGFKGEEAITVLSEKCLIKIREDETIWMHDQIRDMGWQIVVDENLVDPGMRSRLWDRSQILAVLRNFKGTSRTHGMVLDFEEGDAKNHKGDEAISGKNLLCGSSFFANVVTFLKQMHKKSFQRVESDQEAVVLHTKSFKSMVKLMLLQINNLRLEGKFKSFPAKLKWLQWQGCPLKCMPSDFWPRELAVLDLTRSNVEKLWDRKGSKVPENIMVLNLSDCYHLEALPDLFGCRHLEKIVLVTCKKLSRIHESVGNLITLRHLNLTRCEELTELPNDISGLKNLESLCLSDCYKFKSLPRNMANLKSLRKLLADGTAIEELPQTILGLDKLEILLLNGCQNLKRLPNNIGLLCSLQELSLDKSGLEELPNSVGHLKKLERLGLIYCKSLTEIPDSIGDLVSLPKLQLNGSAIEELPSSIGLLSCINELSVGYCKFLKKLPESIKLLASVVELQLDWTAITDLPNEIGDMRLLRNLQMRNCQMRTLPESIGHLAALTTLNISSGKIEELPESIGMLENLVRLRLDECRLLRKLPDSIGSLKSLRHLGLEETGLTELPKSFGMLTNLTTLKMANKSENNLLEDSSVISSLFCNMISLNYLDASRWRISGKIPDDFENLSSLETLNLSQNKFHSLPSSMAGLSILKELRLENCIELVSLPALPSSLTKLNAADCCNLQSIHDLSNLTNLQDLNFTNCVKLVDIPGLERLGSLRKLFFGGCMTCSSTIRKRFSKVTLRNLRNLSMPATRLPKWFSGQSVSFSKPKNRELTGVIIGIILSINRDIPSEKRDLLPGVVDIKANVIKHGETVHTSVLDLRGLPRTNEEHIHLCRYPDYSRFISVMRHGDTICVTQRDPPLDKGLELKKCGINLIFEGDDDFGGDEESVDPSLQSMSEKLAKFFNTCEEDNSKDGIESDDDDECQM 1376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1105 1376 Pfam NB-ARC domain 197 423 IPR002182 GO:0043531
Lele49g1105 1376 SUPERFAMILY L domain-like 894 1199 - -
Lele49g1105 1376 Pfam TIR domain 20 181 IPR000157 GO:0007165
Lele49g1105 1376 ProSiteProfiles Leucine-rich repeat profile. 1076 1097 IPR001611 GO:0005515
Lele49g1105 1376 Gene3D Ribonuclease Inhibitor 585 796 IPR032675 -
Lele49g1105 1376 Gene3D Ribonuclease Inhibitor 797 896 IPR032675 -
Lele49g1105 1376 SMART LRR_typ_2 810 833 IPR003591 -
Lele49g1105 1376 SMART LRR_typ_2 997 1019 IPR003591 -
Lele49g1105 1376 SMART LRR_typ_2 1074 1097 IPR003591 -
Lele49g1105 1376 SMART LRR_typ_2 950 973 IPR003591 -
Lele49g1105 1376 SMART LRR_typ_2 904 927 IPR003591 -
Lele49g1105 1376 SMART LRR_typ_2 763 786 IPR003591 -
Lele49g1105 1376 SMART LRR_typ_2 857 880 IPR003591 -
Lele49g1105 1376 Gene3D - 343 429 IPR042197 -
Lele49g1105 1376 SMART till_3 18 152 IPR000157 GO:0007165
Lele49g1105 1376 Gene3D Ribonuclease Inhibitor 1122 1271 IPR032675 -
Lele49g1105 1376 Gene3D Ribonuclease Inhibitor 905 1121 IPR032675 -
Lele49g1105 1376 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 439 IPR027417 -
Lele49g1105 1376 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 805 IPR044974 GO:0006952
Lele49g1105 1376 CDD AAA 191 326 - -
Lele49g1105 1376 ProSiteProfiles TIR domain profile. 17 179 IPR000157 GO:0007165
Lele49g1105 1376 Gene3D - 16 176 IPR035897 -
Lele49g1105 1376 PRINTS Disease resistance protein signature 285 299 - -
Lele49g1105 1376 PRINTS Disease resistance protein signature 784 800 - -
Lele49g1105 1376 PRINTS Disease resistance protein signature 213 228 - -
Lele49g1105 1376 PRINTS Disease resistance protein signature 379 393 - -
Lele49g1105 1376 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 153 IPR035897 -
Lele49g1105 1376 SUPERFAMILY L domain-like 486 921 - -
Lele49g1105 1376 Gene3D - 177 338 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1105 Lele-ChrLele49 7290122 7296306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1105 77 886 WRKY Transcription Factor Family AT4G12020 29.746 3.64e-74 271