Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1103 ATGGCTTCTTCTTCTTCCTCCAACGTGAAGCCATGGCTTTGTTTAAGCTTTCTCTTCGTTCTTCAAATTTCTCTGCTCTCACCAATCTGTAATTGTCAGCCTCAGAACATCGAAACCTTCTTTCCAACTGGAACTCCATCCCCAGCTCCTCCACCGAACATTTCTCCATCGCCGCCGGCTGTGCCGCCGTTGTCGCCGGTGCCGGCGGGAACAACCAGAAGTTCTTCATCATCATCGAACAGTAAGGTAGGGAAGGCGGTGGCTATTACTGCAGCAAGCACTGTGGTTGTTTCTGCGTTAGTCTTCTTCTTTATTCGATGGTGTTTAAAGAAAAGACGCAGAGAAGAGAGACGTGTGAGCTCTGCTTCGGAACCTTGTGATGGAAATGGAAGAGACGTTGAAACTCAGTCGAACGCGTTCGAGAGAATTGAAGGGAATGTGAAGGGCTTGATTGTTGATGAGGATGGTTTGGATGTGATTTATTGGAGGAAACTTCAAGAGAAGAAGAATAGCTCCAAGAAGGGATTACAGAGAGAGGTTCAAACCATCGCTAAAGAACAAGATCATCAAGAACAAGAAGTAGAAGTAGAAGAAGAAGATGATGATGGGGGAAATCGTGGCCGGAAAAAACCTGAGCGTGTTCAAGAAATCCCTCTGCTTCGTGGAAAGTCTTCGGCTTCCGAGAAGAACTTATTAATATCAGAAGATGAACATGGGTCGAACAGGAGTTGGAGTTGGAGGAGAACGTTGTCTCGAAAAATAGCCCCACCATCTCTTCCTCCTCCGGTGACCACGACGGCGGCGACTGTTTCCCCACCAGTACCACCACCTCCCGCCGCTTATCTTTCTGCGGTTTCAAAGGCGAAAAACGTTGAACCACCGCCACCGCCACCATCCCATGTTGCTGCTGCTTCTTCTTCTTCTTCTGTTTCACCACCGTTACCCCCGCCACCTTCTGCTTACTTTTCTGCTGTTAACAAAACGAAAAGCACTGAACAACCACCACCTCCACCTCCACCTCAACCTCCTCCTCCGTCAATTCCAGATAAAAAGAGTCCGTCGCCGCCTCCCCCGCCTCCAACTGCGCAGGCTAAAAAGAGTCCAGCACCACCACCACCTGCTCCGCCCATGGCCGGAAAAAACTTGAGGTCATCTTCAAAACCACCACCAACCCCAGTTGAACTTTCAGGGGAAGACAATGATAAAGTGAAACTCAAGCCTTTACATTGGGATAAAGTCACCACTAATCTTGATCATTCCATGGTTTGGGACAAATTGGATCGTGGCTCCTTCAGGGTTGATCAAGATCTTATGGAAGCTCTTTTTGGATATGTGGCTACAAGCAAAAGAACACCAAGAGGGAAAGACAATTCAACTAGTCCAACCAAGGAGGCTTATTCTTCTGCCGCACAATCAAGCACAACTTTCATACTTGAATCCAGAAAATCACAGAACATTGCTATTGTTTTGAGATCTCTAGCGGTGTCGCGCCGGGAAATTCTCGAAGCCCTCGATGAGGGTTCAGGCCTGAATTCGGATACAATTGAGAAGCTTGTTAGAGTTGCTCCAACACAAGAAGAACAATCTGAAATCATTGATTATAATGGAGACCCTGCAAAACTTGCTGTTGCAGAATCCTTCCTTTATGATATTCTCAAAGCTGTTCCTTCAGCTTTCAAGCGCTTGAATGCTATGCTTTTCAGGTCCAATTATGATTCTGAGATATTAGAGATCAAGGAATCTTTGAACACCCTTGAATCAGGCTGCAAGGAGCTTCGAAATCGAGGGCTTTTCGTTAAACTTCTCGAAGCAGTTCTTAAGGCCGGGAACCGTATGAATGCTGGTACTTCAAGAGGGAATGCTCAAGCTTTTAACTTGACTTCTTTGAGGAAGCTCTCTGATGTGAAAAGCACAGATGGAAAAACCACATTGCTTCACTTTGTCGTCGAAGAAGTAGTCCGAACCGAGGGAAAACGGTGCGTTCTTAACCGAGATCGAAGCCTGAATCGAAGTGGAAGTAGTAGTAGGAGAATGAACTCTGAGAATGGGAACTCTCTTTCAGATGAACAGAGAGAAATGGAATACCTAAAGTTAGGGTTACCATTTGTTGGAGGAATCAGCACTGAATTCTCCAATGTGAAGAAAGCAGCCATTATAGATTACAATAGTTTAGTTTCTTCAATCTCATTGCTTTCAACTCGGATAGCAGAAATCAAACAACTTGTTTCAAAGTGTGGTGGTGGGAATGGTAATAATAAAGGAGGGAACTTTGTGAGAGAAATGGAACATTTTCTGAGAAATGCAGAGGATGAATTGAGATCAGTGAGAGATGAACAAACAAGGGTAATGCAGATTGTGAAGAAAACAACAGACTATTATCAAGGAGGAGCTTTTAAAGATACGGCAGAGAATCTTCTGGAAATATTTGTCATTGTCAAGGATTTTCTGGGGATGGTTGATCAGGCATGTGTTGACATTGCTCGTAGTATGCAGAAGAAAAAGAAGTCAACAAAATCAAATTCTGGGTAA 2529 0.448 MASSSSSNVKPWLCLSFLFVLQISLLSPICNCQPQNIETFFPTGTPSPAPPPNISPSPPAVPPLSPVPAGTTRSSSSSSNSKVGKAVAITAASTVVVSALVFFFIRWCLKKRRREERRVSSASEPCDGNGRDVETQSNAFERIEGNVKGLIVDEDGLDVIYWRKLQEKKNSSKKGLQREVQTIAKEQDHQEQEVEVEEEDDDGGNRGRKKPERVQEIPLLRGKSSASEKNLLISEDEHGSNRSWSWRRTLSRKIAPPSLPPPVTTTAATVSPPVPPPPAAYLSAVSKAKNVEPPPPPPSHVAAASSSSSVSPPLPPPPSAYFSAVNKTKSTEQPPPPPPPQPPPPSIPDKKSPSPPPPPPTAQAKKSPAPPPPAPPMAGKNLRSSSKPPPTPVELSGEDNDKVKLKPLHWDKVTTNLDHSMVWDKLDRGSFRVDQDLMEALFGYVATSKRTPRGKDNSTSPTKEAYSSAAQSSTTFILESRKSQNIAIVLRSLAVSRREILEALDEGSGLNSDTIEKLVRVAPTQEEQSEIIDYNGDPAKLAVAESFLYDILKAVPSAFKRLNAMLFRSNYDSEILEIKESLNTLESGCKELRNRGLFVKLLEAVLKAGNRMNAGTSRGNAQAFNLTSLRKLSDVKSTDGKTTLLHFVVEEVVRTEGKRCVLNRDRSLNRSGSSSRRMNSENGNSLSDEQREMEYLKLGLPFVGGISTEFSNVKKAAIIDYNSLVSSISLLSTRIAEIKQLVSKCGGGNGNNKGGNFVREMEHFLRNAEDELRSVRDEQTRVMQIVKKTTDYYQGGAFKDTAENLLEIFVIVKDFLGMVDQACVDIARSMQKKKKSTKSNSG 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1103 842 PANTHER FORMIN-RELATED 308 830 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lele49g1103 842 MobiDBLite consensus disorder prediction 664 688 - -
Lele49g1103 842 Gene3D Formin, FH2 domain 418 841 IPR042201 -
Lele49g1103 842 MobiDBLite consensus disorder prediction 255 280 - -
Lele49g1103 842 MobiDBLite consensus disorder prediction 666 686 - -
Lele49g1103 842 ProSiteProfiles Formin homology-2 (FH2) domain profile. 395 842 IPR015425 -
Lele49g1103 842 SMART it6_source 395 834 IPR015425 -
Lele49g1103 842 Coils Coil 758 778 - -
Lele49g1103 842 MobiDBLite consensus disorder prediction 183 400 - -
Lele49g1103 842 SUPERFAMILY Formin homology 2 domain (FH2 domain) 335 835 - -
Lele49g1103 842 Coils Coil 173 193 - -
Lele49g1103 842 Coils Coil 575 595 - -
Lele49g1103 842 Pfam Formin Homology 2 Domain 399 819 IPR015425 -
Lele49g1103 842 MobiDBLite consensus disorder prediction 201 217 - -
Lele49g1103 842 MobiDBLite consensus disorder prediction 44 66 - -
Lele49g1103 842 MobiDBLite consensus disorder prediction 42 80 - -
Lele49g1103 842 MobiDBLite consensus disorder prediction 331 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1103 Lele-ChrLele49 7264002 7266622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1103 384 834 FH2 protein (formin) Gene Family AT1G70140 57.424 8.03e-174 519