Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1093 ATGTCTCGCACTTGCTCGCAGTGTGGCAACAACGGCCATAACTCCCGTACATGCATCCACGGCGGCGGCGCCGAATCTAAAGAGAACGGGATTATGCTGTTCGGAGTGCGACTCACCCAAGGGAACTCGTTCAGGAAGAGCGCTAGTATGACGAATCTGTCGCAGTTTGAGGCTCAAGCTCAGGATTCCAACACAGTCGACGCTGGTTACGCTTCCGACGACGTCGTTCACGCCTCCGGACGGACTCGCGAGCGGAAGAGAGGTAACATTAATATATATAATCGCGAGTTTTTTGTGGTCGTTAGTGTTGAAAATGAATGGTTTGTTTGGACTTGGAGATTTAGTATTCTGTATTTGGATTTGATTGATTTTGAAGGTGTTCCCTGGACGGAGGAAGAGCACAGGTTATTCCTATTGGGATTACAGAAAGTCGGAAAGGGAGATTGGAGAGGGATTTCTAAGAACTTCGTCAAAACTCGGACGCCGACTCAGGTGGCGAGTCATGCTCAGAAGTACTTCCTTCGTCGCCACAACCATAATCGGAGACGCCGGAGATCTAGTCTCTTTGACATCACCACCGATACTGTGATGGAAACCTCCTTAATGGAAGAAGAACCAGTTCACCAAGAAACGGCGGTCCCACCCGCACATCCACAGTTATATTACGGAGGCTTTCCGAGTTCATCTTTACCGACGAAGGTGATAGCCGGAGAGAGACCATCGAAGCCTATTAGGCCGCTACCAATCCTACCAGTCCCTCCGTCGTCGAAAATGGCCACTCTGAATTTGAAAGATAAAGCTCCGATAGATCATCTACCATTATCGCTGAAGCTGCCGACATCGCCGTCAACATCGAATGAGCAGTCACCAGCAAGCAGCCAGTCATCGCCATCACCGGATTTTCAGGCTGGCAAGTTCAGCGGCGGTGGAGATAGCATAATCAGCGTGGCTTGA 954 0.501 MSRTCSQCGNNGHNSRTCIHGGGAESKENGIMLFGVRLTQGNSFRKSASMTNLSQFEAQAQDSNTVDAGYASDDVVHASGRTRERKRGNINIYNREFFVVVSVENEWFVWTWRFSILYLDLIDFEGVPWTEEEHRLFLLGLQKVGKGDWRGISKNFVKTRTPTQVASHAQKYFLRRHNHNRRRRRSSLFDITTDTVMETSLMEEEPVHQETAVPPAHPQLYYGGFPSSSLPTKVIAGERPSKPIRPLPILPVPPSSKMATLNLKDKAPIDHLPLSLKLPTSPSTSNEQSPASSQSSPSPDFQAGKFSGGGDSIISVA 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1093 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 177 IPR017930 -
Lele49g1093 317 PANTHER TRANSCRIPTION FACTOR KUA1 1 283 - -
Lele49g1093 317 SMART sant 125 175 IPR001005 -
Lele49g1093 317 FunFam transcription factor MYB1R1 127 178 - -
Lele49g1093 317 ProSiteProfiles Zinc finger CCHC-type profile. 5 18 IPR001878 GO:0003676|GO:0008270
Lele49g1093 317 MobiDBLite consensus disorder prediction 270 317 - -
Lele49g1093 317 MobiDBLite consensus disorder prediction 277 302 - -
Lele49g1093 317 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 126 175 IPR006447 GO:0003677
Lele49g1093 317 Pfam Myb-like DNA-binding domain 128 173 IPR001005 -
Lele49g1093 317 ProSiteProfiles SANT domain profile. 129 177 IPR017884 -
Lele49g1093 317 MobiDBLite consensus disorder prediction 232 254 - -
Lele49g1093 317 Gene3D - 127 178 - -
Lele49g1093 317 ProSiteProfiles Myb-like domain profile. 128 173 IPR001005 -
Lele49g1093 317 SUPERFAMILY Homeodomain-like 127 176 IPR009057 -
Lele49g1093 317 CDD SANT 128 173 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1093 Lele-ChrLele49 7163367 7164409 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele49g1093 Myb_DNA-binding 4.4e-11 CL0123