Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1086 ATGTCGGTTTCCTGCTCCGATCACTACTTTTGTGACTCCGACCTTCTTTGTTGTGAGGATACATCCGGAATCTTGTCCGGAGAGGCGCCGGAATGCTCCTCAGACCTTGATTCCTCGCCATCACCAGTATTTCTAGAGGAGTCCATAGCCGGATTCATCGAAGACGAGGGCAACTTCGTTCCTGGATTCGATTACTTCTCCAGATTTCAATCTCAATCGCTCGACTCCTCCGCCAGAGAAGAATCCGTTGCATGGATTCTCAAGGTTCAAGCATACTATGGTTTTCAGCCGCTGACGGCGTATCTTTCCGTCAACTATTTGGACCGGTTCTTGGATGCTCGGGAGTTGCCTCAAACGGATGGGTGGCCGATGCAACTTTTATCTGTTGCTTGTTTGTCATTAGCTGCAAAAATGGAGGAACCTTTAGTTCCGCCCCTCTTGGATCTTCAGGTAGAAAGTGCCAAATATATATTTGAGCCAAGAACAATTCGTCGGATGGAACTACTTGTTCTGAGTGTTTTGGATTGGAGGCTAAGATCAATCACGCCATTCAGTTTCATAGATTTCTTTGCTTGCAAACTCGATCCAACGGGAACTTTTACTGGGTTACTCATTTCTCGGGCTACAGAAATAATCTCATCTAATATCCAAGAGCCTAGCTTTCTTGCCTATCGGCCATCATGTATTGCCGTCGCGGCCATACTTTGTGCAGCTAATGAAATTCCTAATTGGTCTCTTGTTAAGCCTGAGCATGCTGAGTCATGGTGTGAGGGACTAATAAAAGAGAAAATCATAGGTTGCTACCAGTTGATGCAAGAACTTGTGGTTGACAATAATACGAGGAAGCTCCCTAAAGTCTTACCACAGTTGCGAGTAACGATCCAACCCAGAGTGAGTTCAAGTATTTTATCACTGTCTGAGTCTTCCTCCTCCTCTTCCTCTTCCTCTTCGTCCGCTACTTCCTCGTCGCCTTGTAAGAGGAGGAAATTAAATAACTGCTTGTGGGTGGATGATGACAAAGGAACCTCCCAGTGA 1035 0.4589 MSVSCSDHYFCDSDLLCCEDTSGILSGEAPECSSDLDSSPSPVFLEESIAGFIEDEGNFVPGFDYFSRFQSQSLDSSAREESVAWILKVQAYYGFQPLTAYLSVNYLDRFLDARELPQTDGWPMQLLSVACLSLAAKMEEPLVPPLLDLQVESAKYIFEPRTIRRMELLVLSVLDWRLRSITPFSFIDFFACKLDPTGTFTGLLISRATEIISSNIQEPSFLAYRPSCIAVAAILCAANEIPNWSLVKPEHAESWCEGLIKEKIIGCYQLMQELVVDNNTRKLPKVLPQLRVTIQPRVSSSILSLSESSSSSSSSSSSATSSSPCKRRKLNNCLWVDDDKGTSQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1086 344 PANTHER CYCLINS 61 279 IPR039361 -
Lele49g1086 344 Gene3D - 62 179 - -
Lele49g1086 344 SMART Cyclin_C_2 181 306 IPR004367 -
Lele49g1086 344 MobiDBLite consensus disorder prediction 306 326 - -
Lele49g1086 344 FunFam D2/4-type cyclin 62 179 - -
Lele49g1086 344 Pfam Cyclin, N-terminal domain 51 178 IPR006671 -
Lele49g1086 344 Pfam Cyclin, C-terminal domain 181 290 IPR004367 -
Lele49g1086 344 Gene3D - 53 242 - -
Lele49g1086 344 ProSitePatterns Cyclins signature. 79 110 IPR006671 -
Lele49g1086 344 SUPERFAMILY Cyclin-like 45 178 IPR036915 -
Lele49g1086 344 SMART cyclin_7 84 172 IPR013763 -
Lele49g1086 344 CDD CYCLIN 85 171 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1086 Lele-ChrLele49 7099659 7102080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1086 1 344 Core Cell Cycle Gene Families AT1G70210 61.782 8.96e-138 393