Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1078 ATGGTCGCATTATCGGGTGCTCACACCATAGGATTCTCTCACTGCAACCAATTCAGCTACAGGATTTTCAATTTCAGCAAGACCTCACCCAGCGATCCAGCGATGAACAGCCAATATGTAGAAGGATTGAAGAAATTGTGCGAGAATGCAAGCAAAGATCCATCAATGAGCGCCTTCAACGACGTGATGACGCCGAGGAATTTCGACAACATGTATTACCGGAATCTGCAGAGAGGATTAGGGTTGCTAGCGACGGATACGGCGTTGTGGCTGGACCAGAGGACGAAACCGTTCGTGGATCAATACGCATCGGATCAGAACAAGTTCTTCCAAGATTTTGCTAATGCGATGATTAAACTTAGCAATCTGGACATTAAGACGGGGAATCAAGGAGAAATTCGTAACAGATGCGATAATTTCAATTAA 426 0.4507 MVALSGAHTIGFSHCNQFSYRIFNFSKTSPSDPAMNSQYVEGLKKLCENASKDPSMSAFNDVMTPRNFDNMYYRNLQRGLGLLATDTALWLDQRTKPFVDQYASDQNKFFQDFANAMIKLSNLDIKTGNQGEIRNRCDNFN 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1078 141 FunFam Peroxidase 1 120 - -
Lele49g1078 141 SUPERFAMILY Heme-dependent peroxidases 1 141 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele49g1078 141 PRINTS Plant peroxidase signature 115 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele49g1078 141 PRINTS Plant peroxidase signature 75 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele49g1078 141 PRINTS Plant peroxidase signature 59 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele49g1078 141 Gene3D Peroxidase, domain 2 1 120 - -
Lele49g1078 141 Gene3D - 121 141 - -
Lele49g1078 141 PANTHER - 1 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele49g1078 141 Pfam Peroxidase 1 105 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele49g1078 141 ProSiteProfiles Plant heme peroxidase family profile. 1 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1078 Lele-ChrLele49 7030321 7030746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1078 1 141 Peroxidase AT5G47000 55.319 2.99e-52 166