Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1076 ATGGAAAAGAAAAGTGTTGTGTGCGATGTTTCTTCAGCATGGGAAGGTTCAGAGAATGAACAATCCATGGAGAAGAGGCTGAAGCTATTTGGGTTTGAGTTGAATCCATGTAGCAACAATAAAACCAGTTCAAATGAAGGAAACGAAAGTGTGAACTCTTCAAACTCAGTGCTGTCTTCTTCATCAGGATCTGCAGGTCAAGAGAAGATCATCGTCGTCACAGAATCATCTTCAACAGACAACCCTAATAATATTATTATCAATTCCTCAGACAAGCAGACGAAGTTTGAGTGCCAATACTGCTTCAAGGAGTTCGCAAACTCACAGGCCTTAGGAGGCCATCAAAATGCTCATAAGAAAGAGAGAATGAAGAAGAAGAGGTTTCAGCTTCAAGCCAGGAAAGCTAGCCTCAATTTCTACCTTCAACAACGATCTTTTCAAACCAGTAATAATTATTATCAGTATTATGGATTTAGTTCTGATAATAATTCTTCTTGTTGGTTCTATGATCCTTCTTCATATAACAACTCAGCTGAGTTGTTCAATCTTCATGAAGGATCTCAGATTAGCTTCAGATCATCATCATCAAATCATCATCGTCATCCTGGTCGTCGTCTTCGAGCGTCTTCTTGTATGTTTGATTTCTCTTCTACAGATGATAATTCTTGTAGGCCTTTCATGTTGGAGACTTCGACCCAGAAAACGAATCATAATTCTCAAAAAGCTTTGGATCTTCAACTAGGCTTAGCCTCGGAGTCGAATACAAGAATCTAA 774 0.3889 MEKKSVVCDVSSAWEGSENEQSMEKRLKLFGFELNPCSNNKTSSNEGNESVNSSNSVLSSSSGSAGQEKIIVVTESSSTDNPNNIIINSSDKQTKFECQYCFKEFANSQALGGHQNAHKKERMKKKRFQLQARKASLNFYLQQRSFQTSNNYYQYYGFSSDNNSSCWFYDPSSYNNSAELFNLHEGSQISFRSSSSNHHRHPGRRLRASSCMFDFSSTDDNSCRPFMLETSTQKTNHNSQKALDLQLGLASESNTRI 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1076 257 Gene3D Classic Zinc Finger 75 153 - -
Lele49g1076 257 ProSitePatterns Zinc finger C2H2 type domain signature. 98 118 IPR013087 -
Lele49g1076 257 SUPERFAMILY beta-beta-alpha zinc fingers 93 123 IPR036236 -
Lele49g1076 257 PANTHER ZINC FINGER PROTEIN 5 15 252 IPR044299 GO:0010090
Lele49g1076 257 MobiDBLite consensus disorder prediction 40 62 - -
Lele49g1076 257 ProSiteProfiles Zinc finger C2H2 type domain profile. 96 123 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1076 Lele-ChrLele49 7013754 7014527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1076 26 139 C2H2 Transcription Factor Family AT1G68360 43.478 4.89e-16 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele49g1076 None None None