Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1069 ATGGAAGAACATCTCAGTCCACTTGCTGTTACCCATCTCCTTCAACACACTCTCAGAAGCTTGTGCATTCATGAAAATTCCCAATGGGTTTATGCTGTCTTCTGGAGGATCTTGCCCAGAAACTACCCTCCACCCAAGTGGGAAGGTCAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAACTGGATTTTGGTATGGGAAGATGGTTTCTGCAACTTTGCTGCTTCATCAGCTCCTGAAATCGCCTCCGGCGGTGAATGCCCGGCGGCTGGTTCGTCGGTATACGGCAACTGTGAATTCCAGCACTACCAAGGACTGCAACCAGAGATTTTCTTCAAGATGTCGCATGAGATCTATAACTATGGAGAAGGGTTGATTGGAAAAGTTGCTGCAGATCACAGTCACAAATGGATATACAAAGAACCAAATGATCAAGAAATCAACTTCTTGTCAGCGTGGCACAATTCAGCAGACTCGCACCCAAAGACATGGGAAGCCCAGTTCCAGTCTGGTATAAAGACCATAGCCCTCATCGCCGTCAGAGAAGGTGTAGTGCAACTAGGAGCCGTTCACAAGGTGATTGAAGACTTGAGCTACGTGGTACTTCTGAGGAAAAAGTTCAGCTACATTGAGAGTATCCCAGGCGTGCTGTTGCCTCACCCATCATCTTCTGCATACCCTTACAAGGTTGAATGTTACGGATCAATCCCTGAACAATGGCAATATTTCCAAGGAAGTCCTCTCATCTCACCGCCGCCGCCTGAGCTATATGACCACTTCAACCATCTTCATCAGCAGCAGCCTCTGAAAATCACCCCTTCAATGAGCAGCCTTGAAGCTCTTCTCTCTAAGCTTCCTTCTGTTGTACCACCACCAACTATAGCAACAACACCACATGAACCAGATCTTCATCATCATTATCATCACCATCAAAGGCCCTTGGAGTTCATCGGAATGCAAAAGGCAGCAAAAGAAGAGATTGATAATGATCAGGAAGTTTATAGGCCAGAGCTTGATGTTGGTGAGAGCAGTAGTTCCATACCAGAAGGATACAGCCATCATCATCATCATCATCAGCAGCAGCAGCATTTCCAAGATCAGAATTTGACAAGTAATGGAGCCAACCATGGGTTTTGA 1140 0.4623 MEEHLSPLAVTHLLQHTLRSLCIHENSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWILVWEDGFCNFAASSAPEIASGGECPAAGSSVYGNCEFQHYQGLQPEIFFKMSHEIYNYGEGLIGKVAADHSHKWIYKEPNDQEINFLSAWHNSADSHPKTWEAQFQSGIKTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKFSYIESIPGVLLPHPSSSAYPYKVECYGSIPEQWQYFQGSPLISPPPPELYDHFNHLHQQQPLKITPSMSSLEALLSKLPSVVPPPTIATTPHEPDLHHHYHHHQRPLEFIGMQKAAKEEIDNDQEVYRPELDVGESSSSIPEGYSHHHHHHQQQQHFQDQNLTSNGANHGF 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1069 379 MobiDBLite consensus disorder prediction 364 379 - -
Lele49g1069 379 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 14 208 IPR025610 -
Lele49g1069 379 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 362 - -
Lele49g1069 379 MobiDBLite consensus disorder prediction 340 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1069 Lele-ChrLele49 6925712 6927946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1069 13 219 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 28.302 1.09e-15 76.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g1069 49 6925712 6927946 Lele49g1069 49 6925712 6927946 ECH
Lele49g1069 49 6925712 6927946 Lele51g1084 51 7021421 7023645 hybridization
Lele49g1069 49 6925712 6927946 Lele52g1122 52 7672460 7674777 hybridization