Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1066 ATGAGATGGCATATCAATACAATTATAAGAAGAAAGAAGGATATCAAGGAAACAATTACCCTCTCGCCCTTGATGGCATCAAGATCATATGCTAATCTCTTAGACCTGGTTAGTGGAGGCTTATTTGATGTTCCTCACACCCCAAGACCTTTTTCAAGAGTTATGACAGTTCCTGGAATTATTTCTGACCTAGATGGTCATGGTAATAACGATGCGGATTCAGATGCTAGCTCATCTGGGTGTCGGGAGCGGAAAATAATAGTGGCAAACATGCTGCCATTACAGGCTAGAAGAGATGCAGAATCTACTAAATGGTGTTTCAGTTTGGATGAGGATTCTATTTTACTACAATTGAAAGACGGTTTTTCTCCTGATACTGAGGTTATCTATGTGGGTTCTTTGAAAGTTGAAATAGATGCTCGTGAGCAGGAAGAAGTTGCTCAGAAGCTACTGGAGGATTTCAATTGTGTACCTACCTTTTTACCACATGAACTCCAGAAGAGGTTTTATCTTGGCTTTTGTAAGCAGCAGCTTTGGCCCCTTTTTCATTATATGCTACCTATGTGCCCAGATCACGGTGACCGCTTTGACCGCATGCTTTGGCAGGCTTATGTTTCTGCAAACAAAATATTTTCAGACAAGGTTATGGAAATAATCAATCCCGATGAGGATTTTGTTTGGGTTCATGACTATCACTTGATGGTTTTGCCAACATTTCTTAGGAAGCGATTTAATCGAGTTAAACTTGGATTCTTCCTTCACAGTCCTTTCCCTTCGTCTGAAATTTACAGAACTCTGCCAGTACGAGATGAAATTCTGAAGGGCCTGTTGAATTCAGACTTAATTGGTTTTCATACATTTGATTATGCTCGCCACTTCCTCTCTTGCTGCAGCAGAATGCTGGGTCTGGACTACGAATCTAAGCGGGGACATATAGGTCTTGATTACTTTGGCCGCACTGTATATATTAAAATTTTGCCTGTTGGCATTCACATAGGCAGGCTTGAATCTGTATTAAATCTCCCTTCTACATCTGCTAAAATAAAAGATATTCAGGAAGAGTTCAAGGGCAGGAAGATAATTCTTGGTGTCGATGATATGGATATCTTCAAGGGCATCAATTTGAAACTTCTGGCTATGGAGCAGCTGCTGCAGCAGAACCCAGACTTTCTGGGAAAGGTCGTCCTAGTTCAAATTATAAATCCTGCAAGGGGTTCAGGGAAGGATGTTCAAGAAGCAAAGAAGGAAACAGATTTAATTGCCGAAAGGATCAATGGGACATATGGCTCAAAACATTATCAGCCTGTTGTTCTCATTGACCGTCATGTTCTTCGTTTTGAAAAGAGTGCTTATTATGCTGTAGCAGAGTGTTGCATTGTCAATGCTGTGAGGGATGGTATGAACTTAGTCCCATACAAGTATGTTGTCTGCAGACAAGGAACTACTCAACTGGACAAAGCATTGGGTAGAAAAAGTGATTCCCCTCGTACAGGCATGCTCGTGGTCTCGGAGTTCATTGGTTGTTCCCCTTCTCTAAGTGGAGCAATTAGGGTCAATCCCTGGGATATTGATGCAGTTGCTGATGCAATGTATTTGGCCATTACAACCAGTGATTCAGAGAAGCAATTGAGGCATGATAAACACTATCGATATGTCAGTTCTCATGATGTGGCTTATTGGGCTCGCAGCTTCATGCAGGATTTAGAGAGGGCATGCGCAGATCATTACACCAAAAGGTGCTGGGGAATTGGTTTGGGCCTAGGGTTCAGAGTTGTTTCTCTTTCTCCTGGTTTTAGGAGGTTGTCCATTGACCATGTTGTTTCAGCTTATAAAAGAACTAATAGAAGGGCCATATTTCTTGATTATGATGGTACAATTATTCCGCACTCTTCTATAAATAAAATCCCCAGCTCTGAAGTCATATCTGTGTTGAATGCCCTGTGCAACGATGCCAAGAACAGTGTGTTCATTGTCAGTGGAAGGGGAAGAGATTCTCTTAATGAGTGGTTTGCTTCATGCAAGAGGCTGGGACTTGCGGCTGAGCATGGTTACTTTTTAAGGTGGAATGGAGACTCAGAATGGGAAACCAGTCACTTGTCTTCTGATCTTGAATGGAAAAATATAGTGGAGCCTGTCATGACTTCATATACAGAGGCAACTGATGGGTCTATTATTGAAACTAAAGAAAGTGGCTTAGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGATCATGCCAAGCTAAAGAGTTGTTGGATCACCTGGAAAGCGTGCTTGCTAATGAACCGGCTGTCGTTATGAGGGGCCATCATATCGTGGAAGTCAAGCCACAGGGAATAAGCAAGGGTTTAGTAGCGGAGAAGGTCCTCTCAACACTGGTAGATGGTGGGAATCTGCCAGATTTCGTGATGTGCATAGGAGATGACAGGTCGGACGAAGACATGTTTGAGAGCATATCAAGGATAGTCTCTTGTCCTTCATTGCCAGTTGCTCCAGAGGTCTTTGCTTGCACTGTTGGTGGGAAGCCTAGCAAGGCCAAGTATTATCTTGATGATACTACTGATGTTATAAAACTGCTTAAAGGCCTTGCAGCTGCAGCAAATCCAAAACCAAGGCAACTACCCCAGTTCAAGGTTTCTTTTGAAAGCACGGCTTGA 2658 0.4259 MRWHINTIIRRKKDIKETITLSPLMASRSYANLLDLVSGGLFDVPHTPRPFSRVMTVPGIISDLDGHGNNDADSDASSSGCRERKIIVANMLPLQARRDAESTKWCFSLDEDSILLQLKDGFSPDTEVIYVGSLKVEIDAREQEEVAQKLLEDFNCVPTFLPHELQKRFYLGFCKQQLWPLFHYMLPMCPDHGDRFDRMLWQAYVSANKIFSDKVMEIINPDEDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDEILKGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGIHIGRLESVLNLPSTSAKIKDIQEEFKGRKIILGVDDMDIFKGINLKLLAMEQLLQQNPDFLGKVVLVQIINPARGSGKDVQEAKKETDLIAERINGTYGSKHYQPVVLIDRHVLRFEKSAYYAVAECCIVNAVRDGMNLVPYKYVVCRQGTTQLDKALGRKSDSPRTGMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMYLAITTSDSEKQLRHDKHYRYVSSHDVAYWARSFMQDLERACADHYTKRCWGIGLGLGFRVVSLSPGFRRLSIDHVVSAYKRTNRRAIFLDYDGTIIPHSSINKIPSSEVISVLNALCNDAKNSVFIVSGRGRDSLNEWFASCKRLGLAAEHGYFLRWNGDSEWETSHLSSDLEWKNIVEPVMTSYTEATDGSIIETKESGLVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVMRGHHIVEVKPQGISKGLVAEKVLSTLVDGGNLPDFVMCIGDDRSDEDMFESISRIVSCPSLPVAPEVFACTVGGKPSKAKYYLDDTTDVIKLLKGLAAAANPKPRQLPQFKVSFESTA 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1066 885 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 53 865 IPR001830 GO:0003824|GO:0005992
Lele49g1066 885 Pfam Trehalose-phosphatase 619 853 IPR003337 GO:0003824|GO:0005992
Lele49g1066 885 CDD GT20_TPS 84 569 IPR001830 GO:0003824|GO:0005992
Lele49g1066 885 TIGRFAM T6PP: trehalose-phosphatase 614 863 IPR003337 GO:0003824|GO:0005992
Lele49g1066 885 Gene3D Glycogen Phosphorylase B; 337 553 - -
Lele49g1066 885 SUPERFAMILY HAD-like 616 864 IPR036412 -
Lele49g1066 885 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 77 336 - -
Lele49g1066 885 Gene3D - 745 874 IPR023214 -
Lele49g1066 885 Gene3D - 615 732 IPR023214 -
Lele49g1066 885 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 615 732 - -
Lele49g1066 885 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 84 572 - -
Lele49g1066 885 FunFam Alpha,alpha-trehalose-phosphate synthase 338 553 - -
Lele49g1066 885 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 617 823 IPR006379 -
Lele49g1066 885 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 745 876 - -
Lele49g1066 885 Pfam Glycosyltransferase family 20 84 569 IPR001830 GO:0003824|GO:0005992
Lele49g1066 885 CDD HAD_TPP 617 858 - -
Lele49g1066 885 FunFam Trehalose-6-phosphate synthase 2 699 778 - -
Lele49g1066 885 Gene3D Glycogen Phosphorylase B; 77 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1066 Lele-ChrLele49 6883966 6889190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1066 25 885 Trehalose Biosynthesis Gene Families AT1G60140 72.474 0.0 1346